COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Not detected
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.7 nTPM
HPA:4.2 nTPM
GTEx:20.7 nTPM
FANTOM5:8.4 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA052598
Endothelial cells Not detected
Glandular cells Not detected
Peripheral nerve/ganglion Not detected



COLON - HPA RNA-seqi
Average nTPM 4.2
overview
Male, age 54 		Colon sample 67
nTPM: 2.6
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 5.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 3.2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 4.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 3.5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 8.6
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 4.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 2.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 5.4
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 2.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 2.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 3.6
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 6.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 20.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 20.7
Samples: 373

Max nTPM: 61.4
Min nTPM: 3.1
Std nTPM: 8.6
Median nTPM: 19.3
GTEX-1H3VE-2326-SM-9KNVU 40-49 years, male 61.4
GTEX-1JN6P-2126-SM-ARL98 60-69 years, male 60.2
GTEX-1EMGI-2626-SM-7IGNR 60-69 years, male 50.0
GTEX-1EH9U-1926-SM-7P8QM 60-69 years, male 48.0
GTEX-1GMRU-2626-SM-9WPPM 50-59 years, male 45.1
GTEX-1JMPZ-2626-SM-ARU8Z 30-39 years, male 43.0
GTEX-1LVAO-2826-SM-E9TJH 60-69 years, male 41.8
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 40.3
GTEX-15RJE-2226-SM-6M46A 40-49 years, male 40.0
GTEX-1P4AB-2626-SM-DTXEU 50-59 years, male 39.9
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 39.6
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Colon - Transverse
Average nTPM: 12.1
Samples: 406

Max nTPM: 52.5
Min nTPM: 0.4
Std nTPM: 8.3
Median nTPM: 9.8
GTEX-WVJS-2426-SM-EZ6LI 50-59 years, male 52.5
GTEX-1EMGI-2726-SM-7P8S4 60-69 years, male 50.1
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 46.7
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 42.6
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 40.1
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 37.2
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 35.2
GTEX-17MF6-2426-SM-7LTAM 40-49 years, male 35.1
GTEX-OXRN-2026-SM-E6CHK 50-59 years, male 34.4
GTEX-17HII-2726-SM-7MGVM 50-59 years, male 31.8
GTEX-1EH9U-2026-SM-7PBYS 60-69 years, male 31.7
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 8.4
FF:10014-101C5 62,83,84 years, mixed 8.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.