HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:74.7 nTPM
HPA:74.7 nTPM
GTEx:103.0 nTPM
FANTOM5:110.4 Scaled Tags Per Million
Pig:63.1 nTPM
Mouse:78.6 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 74.7
Sample id Sample description nTPM
Hippocampus
nTPM: 64.6
1911 Female, age 85, right hemisphere 72.3
2621 Female, age 67, right hemisphere 67.6
2148 Female, age 91, left hemisphere 66.7
1898 Male, age 80, left hemisphere 64.1
1855 Male, age 76, left hemisphere 63.4
2529 Female, age 94, left hemisphere 53.6
Dentate gyrus
nTPM: 60.3
1927 Female, age 91, both hemispheres 72.0
2531 Female, age 67, both hemispheres 69.3
2010 Male, age 76, both hemispheres 62.7
2246 Female, age 85, both hemispheres 57.2
2528 Male, age 74, both hemispheres 53.7
2530 Female, age 94, left hemisphere 47.0
Entorhinal gyrus
nTPM: 48.1
2764 Male, age 80, right hemisphere 58.0
1787 Male, age 76, left hemisphere 51.1
2117 Female, age 91, right hemisphere 48.8
2686 Male, age 75, right hemisphere 46.5
1938 Female, age 85, left hemisphere 45.4
2613 Female, age 94, left hemisphere 38.6
Hippocampus, CA1
nTPM: 74.7
2749 Male, age 80, left hemisphere 106.9
2045 Male, age 76, both hemispheres 76.0
1873 Female, age 85, both hemispheres 68.1
2527 Male, age 74, both hemispheres 65.5
2082 Female, age 91, right hemisphere 56.8
Hippocampus, CA2
nTPM: 59.0
1963 Male, age 80, left hemisphere 75.6
2113 Female, age 91, right hemisphere 61.5
1892 Male, age 76, both hemispheres 60.7
2249 Male, age 74, both hemispheres 53.8
1940 Female, age 85, left hemisphere 52.7
2437 Female, age 94, left hemisphere 49.7
Hippocampus, CA3
nTPM: 71.2
2137 Male, age 80, left hemisphere 112.2
2620 Female, age 94, left hemisphere 76.8
2861 Female, age 67, both hemispheres 76.0
1867 Male, age 76, both hemispheres 56.4
1891 Female, age 85, both hemispheres 55.7
2436 Male, age 74, both hemispheres 50.3
Parahippocampal cortex
nTPM: 52.1
2245 Female, age 91, both hemispheres 66.3
1933 Female, age 85, both hemispheres 63.4
2250 Female, age 67, right hemisphere 57.7
2693 Female, age 94, both hemispheres 57.6
2018 Male, age 76, both hemispheres 55.4
1850 Male, age 80, both hemispheres 48.6
2622 Female, age 67, right hemisphere 46.6
2532 Female, age 72, left hemisphere 45.8
1990 Female, age 91, right hemisphere 40.6
2692 Male, age 74, both hemispheres 38.6
Perirhinal gyrus
nTPM: 60.9
1794 Male, age 80, right hemisphere 65.3
1841 Female, age 85, right hemisphere 61.6
2521 Female, age 94, right hemisphere 60.3
2848 Male, age 76, right hemisphere 59.0
1847 Female, age 91, left hemisphere 58.7
Subiculum
nTPM: 50.3
1901 Male, age 80, both hemispheres 62.5
2729 Female, age 91, right hemisphere 56.6
2042 Male, age 76, both hemispheres 51.5
1977 Female, age 85, both hemispheres 50.5
2619 Male, age 74, both hemispheres 43.5
2438 Female, age 94, left hemisphere 37.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 103.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 103.0
Samples: 197

Max nTPM: 222.4
Min nTPM: 7.1
Std nTPM: 40.6
Median nTPM: 99.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 222.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 197.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 194.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 193.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 190.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 188.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 187.7
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 186.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 185.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 182.2
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 179.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 110.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 110.4
FF:10169-103B7 60 years, female 143.3
FF:10153-102I9 76 years, female 77.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 63.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 60.6
Samples: 4

Max nTPM: 73.6
Min nTPM: 39.4
Sample A Female 64.0
Sample B Female 73.6
Sample C Male 39.4
Sample D Male 65.3
Entorhinal cortex
nTPM: 42.3
Samples: 4

Max nTPM: 60.3
Min nTPM: 30.9
Sample A Female 41.8
Sample B Female 30.9
Sample C Male 60.3
Sample D Male 36.1
Subiculum
nTPM: 43.0
Samples: 4

Max nTPM: 50.6
Min nTPM: 38.5
Sample A Female 50.6
Sample B Female 38.5
Sample C Male 41.2
Sample D Male 41.6
Ventral hippocampus
nTPM: 63.1
Samples: 4

Max nTPM: 81.4
Min nTPM: 49.1
Sample A Female 61.6
Sample B Female 49.1
Sample C Male 81.4
Sample D Male 60.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 78.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.1
Samples: 4

Max nTPM: 88.4
Min nTPM: 58.5
Sample A Male 63.3
Sample B Male 58.5
Sample C Female 82.2
Sample D Female 88.4
Hippocampal formation
nTPM: 78.6
Samples: 4

Max nTPM: 88.7
Min nTPM: 71.3
Sample A Male 88.7
Sample B Male 77.4
Sample C Female 77.0
Sample D Female 71.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
70795509 Antisense, RP_050712_01_F12, Mouse strain C57BL/6J (56 days, male) 1.7

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