HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:10.9 nTPM
HPA:10.9 nTPM
GTEx:4.4 nTPM
FANTOM5:38.7 Scaled Tags Per Million
Pig:118.3 nTPM
Mouse:30.5 nTPM
Allen mouse:8.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.9
Sample id Sample description nTPM
Hippocampus
nTPM: 2.3
2148 Female, age 91, left hemisphere 11.6
1911 Female, age 85, right hemisphere 1.2
2621 Female, age 67, right hemisphere 1.2
1855 Male, age 76, left hemisphere 0.0
1898 Male, age 80, left hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 6.3
2531 Female, age 67, both hemispheres 19.0
1927 Female, age 91, both hemispheres 7.9
2246 Female, age 85, both hemispheres 7.1
2528 Male, age 74, both hemispheres 4.1
2010 Male, age 76, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
Entorhinal gyrus
nTPM: 9.2
1938 Female, age 85, left hemisphere 15.4
2764 Male, age 80, right hemisphere 13.8
2613 Female, age 94, left hemisphere 12.7
2686 Male, age 75, right hemisphere 6.6
1787 Male, age 76, left hemisphere 5.8
2117 Female, age 91, right hemisphere 0.9
Hippocampus, CA1
nTPM: 6.5
2045 Male, age 76, both hemispheres 19.5
2082 Female, age 91, right hemisphere 7.9
1873 Female, age 85, both hemispheres 3.3
2527 Male, age 74, both hemispheres 1.9
2749 Male, age 80, left hemisphere 0.0
Hippocampus, CA2
nTPM: 1.0
2113 Female, age 91, right hemisphere 3.3
2249 Male, age 74, both hemispheres 2.2
2437 Female, age 94, left hemisphere 0.8
1892 Male, age 76, both hemispheres 0.0
1940 Female, age 85, left hemisphere 0.0
1963 Male, age 80, left hemisphere 0.0
Hippocampus, CA3
nTPM: 7.2
2620 Female, age 94, left hemisphere 28.4
2861 Female, age 67, both hemispheres 8.8
1891 Female, age 85, both hemispheres 2.4
1867 Male, age 76, both hemispheres 1.9
2137 Male, age 80, left hemisphere 1.7
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 9.1
1933 Female, age 85, both hemispheres 13.9
2250 Female, age 67, right hemisphere 13.9
2693 Female, age 94, both hemispheres 13.4
2622 Female, age 67, right hemisphere 10.8
2245 Female, age 91, both hemispheres 9.9
1850 Male, age 80, both hemispheres 9.5
2532 Female, age 72, left hemisphere 8.6
1990 Female, age 91, right hemisphere 7.5
2692 Male, age 74, both hemispheres 3.0
2018 Male, age 76, both hemispheres 0.2
Perirhinal gyrus
nTPM: 10.9
2521 Female, age 94, right hemisphere 13.6
1841 Female, age 85, right hemisphere 11.5
2848 Male, age 76, right hemisphere 10.1
1847 Female, age 91, left hemisphere 9.9
1794 Male, age 80, right hemisphere 9.1
Subiculum
nTPM: 3.4
1977 Female, age 85, both hemispheres 12.0
2729 Female, age 91, right hemisphere 5.4
2619 Male, age 74, both hemispheres 2.9
1901 Male, age 80, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 4.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.4
Samples: 197

Max nTPM: 17.8
Min nTPM: 0.7
Std nTPM: 2.8
Median nTPM: 3.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 17.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 14.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 13.7
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 13.5
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 12.9
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 12.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 10.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 10.4
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 10.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 10.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 10.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.7
FF:10153-102I9 76 years, female 39.8
FF:10169-103B7 60 years, female 37.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 118.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 54.3
Samples: 4

Max nTPM: 60.8
Min nTPM: 47.7
Sample A Female 57.1
Sample B Female 60.8
Sample C Male 51.6
Sample D Male 47.7
Entorhinal cortex
nTPM: 102.0
Samples: 4

Max nTPM: 110.4
Min nTPM: 85.7
Sample A Female 109.6
Sample B Female 102.4
Sample C Male 110.4
Sample D Male 85.7
Subiculum
nTPM: 118.3
Samples: 4

Max nTPM: 212.6
Min nTPM: 66.2
Sample A Female 212.6
Sample B Female 107.9
Sample C Male 86.5
Sample D Male 66.2
Ventral hippocampus
nTPM: 61.1
Samples: 4

Max nTPM: 78.9
Min nTPM: 43.6
Sample A Female 43.6
Sample B Female 78.9
Sample C Male 71.6
Sample D Male 50.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.5
Samples: 4

Max nTPM: 48.5
Min nTPM: 21.7
Sample A Male 21.7
Sample B Male 23.1
Sample C Female 28.5
Sample D Female 48.5
Hippocampal formation
nTPM: 17.8
Samples: 4

Max nTPM: 19.8
Min nTPM: 16.5
Sample A Male 18.1
Sample B Male 19.8
Sample C Female 16.8
Sample D Female 16.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.6
71809079 Antisense, RP_051005_01_E07, Mouse strain C57BL/6J (56 days, male) 8.6
74363334 Antisense, RP_051005_01_E07, Mouse strain C57BL/6J (56 days, male) 6.8

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