COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:38.4 nTPM
HPA:8.7 nTPM
GTEx:38.4 nTPM
FANTOM5:67.6 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA053280Antibody CAB015180
Endothelial cells MediumMedium
Glandular cells HighMedium
Peripheral nerve/ganglion Not detectedNot detected





COLON - HPA RNA-seqi
Average nTPM 8.7
overview
Male, age 54 		Colon sample 67
nTPM: 8.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 7.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 6.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 8.8
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 5.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 4.5
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 7.7
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 21.6
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 7.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 11.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 8
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 38.4
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 22.7
Samples: 373

Max nTPM: 105.2
Min nTPM: 7.3
Std nTPM: 11.5
Median nTPM: 20.3
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 105.2
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 85.1
GTEX-1H3NZ-2526-SM-9KNVO 60-69 years, male 73.8
GTEX-Y8LW-1126-SM-4VDS4 50-59 years, female 70.9
GTEX-15G19-2726-SM-6LPKG 60-69 years, male 69.7
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 56.5
GTEX-ZE9C-2126-SM-4WKGY 60-69 years, male 56.2
GTEX-Y5V6-1626-SM-4VDT2 60-69 years, male 53.4
GTEX-13W3W-2226-SM-5LU4M 60-69 years, female 52.8
GTEX-VJYA-2126-SM-4KL1O 60-69 years, male 52.1
GTEX-Y8E4-2326-SM-EAZAZ 40-49 years, male 50.6
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Colon - Transverse
Average nTPM: 38.4
Samples: 406

Max nTPM: 235.7
Min nTPM: 7.4
Std nTPM: 23.1
Median nTPM: 33.4
GTEX-1K9T9-2826-SM-D4P3F 50-59 years, female 235.7
GTEX-1B8KZ-1326-SM-7DUG6 50-59 years, male 173.9
GTEX-SNOS-1226-SM-4DM5H 40-49 years, male 161.7
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 120.2
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 115.8
GTEX-ZDYS-2326-SM-4WKG6 50-59 years, male 108.3
GTEX-ZVP2-1526-SM-5NQ82 50-59 years, male 105.8
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 96.9
GTEX-WYVS-1826-SM-4OND6 40-49 years, female 90.3
GTEX-1J1OQ-2726-SM-AHZ3R 40-49 years, female 88.9
GTEX-1LVAM-1626-SM-EV79Y 50-59 years, female 88.6
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 67.6
FF:10014-101C5 62,83,84 years, mixed 67.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.