HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:55.4 nTPM
HPA:55.4 nTPM
GTEx:48.6 nTPM
FANTOM5:139.2 Scaled Tags Per Million
Pig:36.4 nTPM
Mouse:53.4 nTPM
Allen mouse:3.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007861Antibody HPA049676
Glial cells MediumNot detected
Neuronal cells HighLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 55.4
Sample id Sample description nTPM
Hippocampus
nTPM: 53.7
1898 Male, age 80, left hemisphere 56.0
2529 Female, age 94, left hemisphere 54.4
1855 Male, age 76, left hemisphere 54.3
2621 Female, age 67, right hemisphere 52.7
2148 Female, age 91, left hemisphere 52.5
1911 Female, age 85, right hemisphere 52.3
Dentate gyrus
nTPM: 52.6
2246 Female, age 85, both hemispheres 55.1
1927 Female, age 91, both hemispheres 54.0
2010 Male, age 76, both hemispheres 52.4
2528 Male, age 74, both hemispheres 52.3
2530 Female, age 94, left hemisphere 51.5
2531 Female, age 67, both hemispheres 50.0
Entorhinal gyrus
nTPM: 52.3
1938 Female, age 85, left hemisphere 56.9
1787 Male, age 76, left hemisphere 54.9
2764 Male, age 80, right hemisphere 53.1
2117 Female, age 91, right hemisphere 52.6
2686 Male, age 75, right hemisphere 48.8
2613 Female, age 94, left hemisphere 47.7
Hippocampus, CA1
nTPM: 54.0
2527 Male, age 74, both hemispheres 55.4
2749 Male, age 80, left hemisphere 55.0
1873 Female, age 85, both hemispheres 54.8
2082 Female, age 91, right hemisphere 53.9
2045 Male, age 76, both hemispheres 50.9
Hippocampus, CA2
nTPM: 54.2
2249 Male, age 74, both hemispheres 62.1
1892 Male, age 76, both hemispheres 54.1
1963 Male, age 80, left hemisphere 53.2
1940 Female, age 85, left hemisphere 52.9
2113 Female, age 91, right hemisphere 52.2
2437 Female, age 94, left hemisphere 50.5
Hippocampus, CA3
nTPM: 55.0
2436 Male, age 74, both hemispheres 71.0
1891 Female, age 85, both hemispheres 53.1
2137 Male, age 80, left hemisphere 52.7
1867 Male, age 76, both hemispheres 52.1
2620 Female, age 94, left hemisphere 51.4
2861 Female, age 67, both hemispheres 49.4
Parahippocampal cortex
nTPM: 53.2
2250 Female, age 67, right hemisphere 58.3
1933 Female, age 85, both hemispheres 56.1
1850 Male, age 80, both hemispheres 55.2
1990 Female, age 91, right hemisphere 53.9
2245 Female, age 91, both hemispheres 53.6
2018 Male, age 76, both hemispheres 52.0
2532 Female, age 72, left hemisphere 51.9
2622 Female, age 67, right hemisphere 51.1
2692 Male, age 74, both hemispheres 50.9
2693 Female, age 94, both hemispheres 49.1
Perirhinal gyrus
nTPM: 55.4
1847 Female, age 91, left hemisphere 60.3
1841 Female, age 85, right hemisphere 56.3
1794 Male, age 80, right hemisphere 55.6
2848 Male, age 76, right hemisphere 53.7
2521 Female, age 94, right hemisphere 51.4
Subiculum
nTPM: 52.7
1977 Female, age 85, both hemispheres 54.7
2619 Male, age 74, both hemispheres 53.8
2042 Male, age 76, both hemispheres 52.4
1901 Male, age 80, both hemispheres 52.0
2729 Female, age 91, right hemisphere 52.0
2438 Female, age 94, left hemisphere 51.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.6
Samples: 197

Max nTPM: 147.1
Min nTPM: 13.2
Std nTPM: 18.6
Median nTPM: 46.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 147.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 141.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 131.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 126.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 91.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 89.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 88.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 84.8
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 81.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 81.0
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 79.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 139.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 139.2
FF:10153-102I9 76 years, female 188.4
FF:10169-103B7 60 years, female 89.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 35.3
Samples: 4

Max nTPM: 47.8
Min nTPM: 24.7
Sample A Female 47.8
Sample B Female 35.8
Sample C Male 32.7
Sample D Male 24.7
Entorhinal cortex
nTPM: 25.6
Samples: 4

Max nTPM: 29.5
Min nTPM: 21.1
Sample A Female 27.6
Sample B Female 29.5
Sample C Male 24.3
Sample D Male 21.1
Subiculum
nTPM: 30.4
Samples: 4

Max nTPM: 39.4
Min nTPM: 26.5
Sample A Female 39.4
Sample B Female 28.7
Sample C Male 26.5
Sample D Male 27.1
Ventral hippocampus
nTPM: 36.4
Samples: 4

Max nTPM: 43.7
Min nTPM: 26.6
Sample A Female 43.7
Sample B Female 26.6
Sample C Male 38.5
Sample D Male 36.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 53.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.2
Samples: 4

Max nTPM: 47.9
Min nTPM: 40.4
Sample A Male 40.5
Sample B Male 44.0
Sample C Female 47.9
Sample D Female 40.4
Hippocampal formation
nTPM: 53.4
Samples: 4

Max nTPM: 65.5
Min nTPM: 45.9
Sample A Male 52.7
Sample B Male 45.9
Sample C Female 49.3
Sample D Female 65.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.7
68443429 Antisense, RP_050111_02_A02, Mouse strain C57BL/6J (56 days, male) 3.7

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