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UBE2V1
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  • UBE2V1
BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:50.1 nTPM
HPA:50.1 nTPM
GTEx:70.0 nTPM
FANTOM5:124.4 Scaled Tags Per Million
Pig:124.5 nTPM

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max nTPM 50.1
Sample id Sample description nTPM
Amygdala
nTPM: 45.0
2814 Male, age 76, right hemisphere 52.6
2514 Male, age 75, right hemisphere 49.2
1987 Female, age 91, left hemisphere 45.9
2517 Female, age 94, left hemisphere 38.8
2695 Female, age 67, right hemisphere 38.3
Basal amygdala
nTPM: 46.6
2243 Female, age 91, right hemisphere 62.2
1955 Male, age 76, both hemispheres 48.7
2609 Male, age 75, right hemisphere 46.6
2110 Male, age 80, left hemisphere 43.5
2685 Female, age 94, left hemisphere 43.5
2827 Female, age 67, right hemisphere 35.0
Central amygdala
nTPM: 41.8
2239 Male, age 80, left hemisphere 48.3
1905 Male, age 76, both hemispheres 47.2
2701 Female, age 91, right hemisphere 44.2
2515 Male, age 75, right hemisphere 38.0
2826 Female, age 94, left hemisphere 31.5
Corticomedial amygdala
nTPM: 50.1
2242 Female, age 91, right hemisphere 61.6
2829 Male, age 80, left hemisphere 54.1
2240 Male, age 76, both hemispheres 50.6
2429 Female, age 94, left hemisphere 48.8
2428 Male, age 75, right hemisphere 45.9
2535 Female, age 67, right hemisphere 39.4
Lateral amygdala
nTPM: 37.3
1883 Male, age 76, both hemispheres 46.9
2516 Male, age 75, right hemisphere 40.4
2255 Female, age 91, right hemisphere 38.8
2256 Male, age 80, left hemisphere 34.8
2534 Female, age 94, left hemisphere 32.5
2830 Female, age 67, right hemisphere 30.2
Stria terminalis, bed nucleus
nTPM: 49.6
1974 Female, age 91, both hemispheres 53.7
2486 Female, age 94, both hemispheres 48.6
2201 Male, age 74, unknown 46.4

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 70.0
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 70.0
Samples: 152

Max nTPM: 138.4
Min nTPM: 28.9
Std nTPM: 20.9
Median nTPM: 66.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 138.4
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 130.9
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 130.2
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 126.5
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 124.1
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 121.6
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 108.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 107.6
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 105.0
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 103.5
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 103.4
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 102.3
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 98.1
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 96.2
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 95.5
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 95.1
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 93.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 93.1
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 93.0
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 92.5
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 91.2
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 90.9
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 90.7
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 90.2
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 90.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 89.0
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 88.1
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 88.0
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 87.9
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 86.9
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 86.9
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 86.3
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 86.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 85.6
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 85.4
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 85.4
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 84.8
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 83.4
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 83.3
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 82.7
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 82.7
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 81.9
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 81.8
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 80.6
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 79.4
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 79.1
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 78.9
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 78.7
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 78.4
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 78.2
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 77.1
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 76.9
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 75.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 75.0
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 74.5
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 74.2
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 74.2
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 74.1
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 73.3
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 72.7
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 71.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 71.1
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 71.0
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 70.9
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 70.8
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 70.0
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 69.2
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 69.2
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 68.9
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 68.8
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 68.4
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 68.1
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 67.6
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 67.4
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 66.9
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 66.6
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 66.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 66.1
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 66.0
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 65.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 65.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 64.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 64.3
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 64.2
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 64.0
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 63.7
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 63.3
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 62.9
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 62.3
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 62.1
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 62.0
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 61.6
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 61.4
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 61.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 61.1
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 60.6
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 60.4
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 60.2
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 60.2
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 59.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 59.7
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 59.6
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 59.6
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 57.8
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 57.8
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 57.5
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 57.4
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 57.3
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 57.2
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 57.2
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 56.9
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 56.8
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 56.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 56.4
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 56.3
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 55.3
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 55.1
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 55.0
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 54.9
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 53.9
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 53.6
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 53.6
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 53.3
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 53.1
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 53.0
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 52.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 52.2
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 49.4
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 49.0
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 48.4
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 48.3
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 48.1
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 47.5
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 45.6
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 45.0
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 44.7
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 44.4
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 44.3
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 44.3
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 43.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 42.5
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 41.7
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 41.6
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 40.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 40.8
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 40.5
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 40.3
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 39.9
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 39.8
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 33.6
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 33.5
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 28.9
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 124.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 124.4
FF:10151-102I7 76 years, female 124.4

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 124.5
Pig sample Sample description nTPM
Amygdala
nTPM: 124.5
Samples: 4

Max nTPM: 178.3
Min nTPM: 95.9
Sample A Female 178.3
Sample B Female 95.9
Sample C Male 104.2
Sample D Male 119.6

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