HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:26.6 nTPM
HPA:26.6 nTPM
GTEx:16.7 nTPM
FANTOM5:161.2 Scaled Tags Per Million
Mouse:8.9 nTPM
Allen mouse:11.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039338Antibody HPA039434
Glial cells MediumLow
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.6
Sample id Sample description nTPM
Hippocampus
nTPM: 26.6
2621 Female, age 67, right hemisphere 28.7
2529 Female, age 94, left hemisphere 27.9
1855 Male, age 76, left hemisphere 27.0
1898 Male, age 80, left hemisphere 27.0
1911 Female, age 85, right hemisphere 27.0
2148 Female, age 91, left hemisphere 21.9
Dentate gyrus
nTPM: 23.6
2530 Female, age 94, left hemisphere 26.0
2531 Female, age 67, both hemispheres 24.9
1927 Female, age 91, both hemispheres 24.1
2010 Male, age 76, both hemispheres 23.8
2246 Female, age 85, both hemispheres 23.1
2528 Male, age 74, both hemispheres 19.6
Entorhinal gyrus
nTPM: 25.2
2686 Male, age 75, right hemisphere 30.0
1938 Female, age 85, left hemisphere 26.7
2117 Female, age 91, right hemisphere 25.6
1787 Male, age 76, left hemisphere 24.5
2613 Female, age 94, left hemisphere 22.4
2764 Male, age 80, right hemisphere 21.9
Hippocampus, CA1
nTPM: 24.4
2749 Male, age 80, left hemisphere 26.0
2527 Male, age 74, both hemispheres 25.4
1873 Female, age 85, both hemispheres 25.1
2082 Female, age 91, right hemisphere 24.2
2045 Male, age 76, both hemispheres 21.3
Hippocampus, CA2
nTPM: 24.3
1963 Male, age 80, left hemisphere 26.0
1892 Male, age 76, both hemispheres 25.1
2113 Female, age 91, right hemisphere 24.3
1940 Female, age 85, left hemisphere 23.8
2437 Female, age 94, left hemisphere 23.3
2249 Male, age 74, both hemispheres 23.1
Hippocampus, CA3
nTPM: 24.6
1891 Female, age 85, both hemispheres 27.3
2861 Female, age 67, both hemispheres 25.6
2137 Male, age 80, left hemisphere 25.2
1867 Male, age 76, both hemispheres 23.8
2436 Male, age 74, both hemispheres 23.3
2620 Female, age 94, left hemisphere 22.4
Parahippocampal cortex
nTPM: 26.2
2622 Female, age 67, right hemisphere 28.5
2693 Female, age 94, both hemispheres 28.2
1850 Male, age 80, both hemispheres 27.7
2692 Male, age 74, both hemispheres 26.7
2532 Female, age 72, left hemisphere 26.6
2245 Female, age 91, both hemispheres 25.7
2018 Male, age 76, both hemispheres 25.3
2250 Female, age 67, right hemisphere 25.2
1933 Female, age 85, both hemispheres 25.1
1990 Female, age 91, right hemisphere 23.5
Perirhinal gyrus
nTPM: 25.8
1841 Female, age 85, right hemisphere 28.0
2848 Male, age 76, right hemisphere 27.0
2521 Female, age 94, right hemisphere 25.5
1794 Male, age 80, right hemisphere 25.1
1847 Female, age 91, left hemisphere 23.5
Subiculum
nTPM: 25.0
2438 Female, age 94, left hemisphere 28.2
1901 Male, age 80, both hemispheres 26.8
2042 Male, age 76, both hemispheres 25.4
1977 Female, age 85, both hemispheres 23.6
2729 Female, age 91, right hemisphere 23.2
2619 Male, age 74, both hemispheres 22.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.7
Samples: 197

Max nTPM: 32.6
Min nTPM: 10.2
Std nTPM: 3.0
Median nTPM: 16.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 32.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 28.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 24.4
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 23.3
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 23.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 22.7
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 22.5
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 22.3
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 22.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 22.0
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 21.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 161.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 161.2
FF:10169-103B7 60 years, female 175.7
FF:10153-102I9 76 years, female 146.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.1
Samples: 4

Max nTPM: 8.7
Min nTPM: 6.7
Sample A Male 6.7
Sample B Male 8.7
Sample C Female 8.3
Sample D Female 8.5
Hippocampal formation
nTPM: 8.9
Samples: 4

Max nTPM: 9.3
Min nTPM: 8.3
Sample A Male 9.0
Sample B Male 9.3
Sample C Female 8.3
Sample D Female 8.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.1
68637742 Antisense, RP_050126_01_E07, Mouse strain C57BL/6J (56 days, male) 11.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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