HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:27.7 nTPM
HPA:27.7 nTPM
GTEx:32.2 nTPM
FANTOM5:14.6 Scaled Tags Per Million
Pig:25.1 nTPM
Mouse:10.8 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041189
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.7
Sample id Sample description nTPM
Hippocampus
nTPM: 27.6
2529 Female, age 94, left hemisphere 29.1
1911 Female, age 85, right hemisphere 29.0
1898 Male, age 80, left hemisphere 27.6
1855 Male, age 76, left hemisphere 26.7
2621 Female, age 67, right hemisphere 26.6
2148 Female, age 91, left hemisphere 26.5
Dentate gyrus
nTPM: 27.1
2530 Female, age 94, left hemisphere 30.1
2010 Male, age 76, both hemispheres 28.2
2246 Female, age 85, both hemispheres 27.3
2531 Female, age 67, both hemispheres 26.3
2528 Male, age 74, both hemispheres 26.0
1927 Female, age 91, both hemispheres 24.9
Entorhinal gyrus
nTPM: 27.7
1938 Female, age 85, left hemisphere 28.6
2117 Female, age 91, right hemisphere 28.6
2764 Male, age 80, right hemisphere 27.8
2613 Female, age 94, left hemisphere 27.2
1787 Male, age 76, left hemisphere 27.0
2686 Male, age 75, right hemisphere 26.8
Hippocampus, CA1
nTPM: 26.7
2749 Male, age 80, left hemisphere 27.2
2082 Female, age 91, right hemisphere 27.1
1873 Female, age 85, both hemispheres 26.9
2045 Male, age 76, both hemispheres 26.7
2527 Male, age 74, both hemispheres 25.9
Hippocampus, CA2
nTPM: 27.7
2249 Male, age 74, both hemispheres 29.2
2437 Female, age 94, left hemisphere 28.9
1940 Female, age 85, left hemisphere 28.2
1963 Male, age 80, left hemisphere 27.4
1892 Male, age 76, both hemispheres 26.4
2113 Female, age 91, right hemisphere 25.9
Hippocampus, CA3
nTPM: 27.3
1867 Male, age 76, both hemispheres 28.7
2436 Male, age 74, both hemispheres 28.5
2137 Male, age 80, left hemisphere 27.5
1891 Female, age 85, both hemispheres 27.1
2861 Female, age 67, both hemispheres 26.1
2620 Female, age 94, left hemisphere 25.7
Parahippocampal cortex
nTPM: 26.6
2018 Male, age 76, both hemispheres 30.3
2245 Female, age 91, both hemispheres 27.9
2692 Male, age 74, both hemispheres 27.1
2532 Female, age 72, left hemisphere 27.0
1990 Female, age 91, right hemisphere 26.7
1850 Male, age 80, both hemispheres 25.8
1933 Female, age 85, both hemispheres 25.8
2250 Female, age 67, right hemisphere 25.5
2622 Female, age 67, right hemisphere 25.0
2693 Female, age 94, both hemispheres 24.5
Perirhinal gyrus
nTPM: 25.7
1794 Male, age 80, right hemisphere 26.5
2521 Female, age 94, right hemisphere 26.3
1841 Female, age 85, right hemisphere 25.5
2848 Male, age 76, right hemisphere 25.3
1847 Female, age 91, left hemisphere 24.8
Subiculum
nTPM: 27.7
2042 Male, age 76, both hemispheres 31.4
1901 Male, age 80, both hemispheres 29.8
1977 Female, age 85, both hemispheres 27.0
2619 Male, age 74, both hemispheres 26.8
2729 Female, age 91, right hemisphere 25.9
2438 Female, age 94, left hemisphere 25.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.2
Samples: 197

Max nTPM: 105.5
Min nTPM: 9.3
Std nTPM: 14.1
Median nTPM: 29.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 105.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 82.2
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 71.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 67.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 65.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 61.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 60.3
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 58.5
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 58.3
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 57.1
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 56.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.6
FF:10169-103B7 60 years, female 16.7
FF:10153-102I9 76 years, female 12.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.1
Samples: 4

Max nTPM: 34.2
Min nTPM: 21.1
Sample A Female 34.2
Sample B Female 21.1
Sample C Male 22.2
Sample D Male 22.9
Entorhinal cortex
nTPM: 16.2
Samples: 4

Max nTPM: 19.0
Min nTPM: 13.8
Sample A Female 14.2
Sample B Female 19.0
Sample C Male 17.7
Sample D Male 13.8
Subiculum
nTPM: 16.1
Samples: 4

Max nTPM: 19.4
Min nTPM: 13.2
Sample A Female 19.4
Sample B Female 13.2
Sample C Male 17.0
Sample D Male 14.7
Ventral hippocampus
nTPM: 22.6
Samples: 4

Max nTPM: 27.8
Min nTPM: 14.2
Sample A Female 24.9
Sample B Female 14.2
Sample C Male 27.8
Sample D Male 23.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.8
Samples: 4

Max nTPM: 13.0
Min nTPM: 8.9
Sample A Male 10.3
Sample B Male 13.0
Sample C Female 11.1
Sample D Female 8.9
Hippocampal formation
nTPM: 10.4
Samples: 4

Max nTPM: 11.9
Min nTPM: 9.0
Sample A Male 11.9
Sample B Male 9.0
Sample C Female 9.4
Sample D Female 11.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71789757 Antisense, RP_050921_01_H05, Mouse strain C57BL/6J (56 days, male) 0.1

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