HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:16.4 nTPM
HPA:16.4 nTPM
GTEx:12.8 nTPM
FANTOM5:13.3 Scaled Tags Per Million
Mouse:31.7 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.4
Sample id Sample description nTPM
Hippocampus
nTPM: 15.9
1898 Male, age 80, left hemisphere 17.2
1911 Female, age 85, right hemisphere 16.0
2621 Female, age 67, right hemisphere 16.0
1855 Male, age 76, left hemisphere 15.8
2148 Female, age 91, left hemisphere 15.4
2529 Female, age 94, left hemisphere 15.0
Dentate gyrus
nTPM: 15.0
1927 Female, age 91, both hemispheres 16.7
2530 Female, age 94, left hemisphere 15.5
2010 Male, age 76, both hemispheres 15.2
2528 Male, age 74, both hemispheres 14.7
2246 Female, age 85, both hemispheres 14.5
2531 Female, age 67, both hemispheres 13.7
Entorhinal gyrus
nTPM: 15.6
2613 Female, age 94, left hemisphere 17.8
2117 Female, age 91, right hemisphere 16.6
1938 Female, age 85, left hemisphere 16.1
2764 Male, age 80, right hemisphere 14.7
1787 Male, age 76, left hemisphere 14.4
2686 Male, age 75, right hemisphere 13.8
Hippocampus, CA1
nTPM: 16.4
2749 Male, age 80, left hemisphere 23.1
1873 Female, age 85, both hemispheres 15.7
2527 Male, age 74, both hemispheres 15.5
2045 Male, age 76, both hemispheres 13.7
2082 Female, age 91, right hemisphere 13.7
Hippocampus, CA2
nTPM: 15.4
1963 Male, age 80, left hemisphere 16.6
1940 Female, age 85, left hemisphere 16.2
2249 Male, age 74, both hemispheres 15.5
2113 Female, age 91, right hemisphere 14.8
2437 Female, age 94, left hemisphere 14.8
1892 Male, age 76, both hemispheres 14.6
Hippocampus, CA3
nTPM: 15.8
2137 Male, age 80, left hemisphere 21.7
2861 Female, age 67, both hemispheres 16.3
2436 Male, age 74, both hemispheres 14.9
1867 Male, age 76, both hemispheres 14.4
1891 Female, age 85, both hemispheres 14.1
2620 Female, age 94, left hemisphere 13.6
Parahippocampal cortex
nTPM: 14.7
2245 Female, age 91, both hemispheres 16.5
2250 Female, age 67, right hemisphere 16.0
1933 Female, age 85, both hemispheres 15.4
2622 Female, age 67, right hemisphere 15.2
1990 Female, age 91, right hemisphere 14.8
2693 Female, age 94, both hemispheres 14.5
2018 Male, age 76, both hemispheres 14.2
1850 Male, age 80, both hemispheres 13.9
2532 Female, age 72, left hemisphere 13.4
2692 Male, age 74, both hemispheres 12.9
Perirhinal gyrus
nTPM: 14.8
1841 Female, age 85, right hemisphere 16.0
1794 Male, age 80, right hemisphere 15.0
1847 Female, age 91, left hemisphere 15.0
2521 Female, age 94, right hemisphere 14.7
2848 Male, age 76, right hemisphere 13.1
Subiculum
nTPM: 15.0
1901 Male, age 80, both hemispheres 17.4
2042 Male, age 76, both hemispheres 15.9
2729 Female, age 91, right hemisphere 15.6
1977 Female, age 85, both hemispheres 15.1
2619 Male, age 74, both hemispheres 13.4
2438 Female, age 94, left hemisphere 12.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.8
Samples: 197

Max nTPM: 37.8
Min nTPM: 6.0
Std nTPM: 4.0
Median nTPM: 12.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 37.8
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 21.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 21.3
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 21.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 21.3
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 21.2
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 21.1
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 21.1
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 20.9
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 20.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 20.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.3
FF:10169-103B7 60 years, female 16.7
FF:10153-102I9 76 years, female 9.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.4
Samples: 4

Max nTPM: 24.7
Min nTPM: 20.9
Sample A Male 24.7
Sample B Male 20.9
Sample C Female 24.0
Sample D Female 24.1
Hippocampal formation
nTPM: 31.8
Samples: 4

Max nTPM: 36.3
Min nTPM: 26.5
Sample A Male 30.5
Sample B Male 36.3
Sample C Female 33.7
Sample D Female 26.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.