HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:32.3 nTPM
HPA:32.3 nTPM
GTEx:29.0 nTPM
FANTOM5:83.9 Scaled Tags Per Million
Pig:79.5 nTPM
Mouse:74.9 nTPM
Allen mouse:6.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026638Antibody CAB004595
Glial cells MediumHigh
Neuronal cells Medium-





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.3
Sample id Sample description nTPM
Hippocampus
nTPM: 29.8
1911 Female, age 85, right hemisphere 32.0
2148 Female, age 91, left hemisphere 30.0
2529 Female, age 94, left hemisphere 29.8
2621 Female, age 67, right hemisphere 29.3
1898 Male, age 80, left hemisphere 29.0
1855 Male, age 76, left hemisphere 28.8
Dentate gyrus
nTPM: 29.0
1927 Female, age 91, both hemispheres 32.7
2246 Female, age 85, both hemispheres 31.7
2528 Male, age 74, both hemispheres 29.4
2531 Female, age 67, both hemispheres 29.2
2010 Male, age 76, both hemispheres 27.6
2530 Female, age 94, left hemisphere 23.6
Entorhinal gyrus
nTPM: 28.1
2117 Female, age 91, right hemisphere 29.9
1938 Female, age 85, left hemisphere 29.3
2764 Male, age 80, right hemisphere 28.5
2686 Male, age 75, right hemisphere 27.6
1787 Male, age 76, left hemisphere 27.3
2613 Female, age 94, left hemisphere 25.8
Hippocampus, CA1
nTPM: 32.3
2749 Male, age 80, left hemisphere 39.2
1873 Female, age 85, both hemispheres 35.1
2045 Male, age 76, both hemispheres 30.6
2527 Male, age 74, both hemispheres 29.0
2082 Female, age 91, right hemisphere 27.7
Hippocampus, CA2
nTPM: 29.1
1892 Male, age 76, both hemispheres 32.7
1963 Male, age 80, left hemisphere 31.4
2113 Female, age 91, right hemisphere 30.3
2249 Male, age 74, both hemispheres 29.5
1940 Female, age 85, left hemisphere 26.2
2437 Female, age 94, left hemisphere 24.4
Hippocampus, CA3
nTPM: 31.2
2137 Male, age 80, left hemisphere 37.5
2436 Male, age 74, both hemispheres 33.6
1891 Female, age 85, both hemispheres 30.8
2620 Female, age 94, left hemisphere 30.3
1867 Male, age 76, both hemispheres 29.5
2861 Female, age 67, both hemispheres 25.4
Parahippocampal cortex
nTPM: 28.3
2693 Female, age 94, both hemispheres 33.1
1933 Female, age 85, both hemispheres 31.7
1850 Male, age 80, both hemispheres 29.8
2250 Female, age 67, right hemisphere 29.2
1990 Female, age 91, right hemisphere 28.4
2692 Male, age 74, both hemispheres 27.8
2018 Male, age 76, both hemispheres 26.7
2245 Female, age 91, both hemispheres 25.7
2622 Female, age 67, right hemisphere 25.3
2532 Female, age 72, left hemisphere 25.0
Perirhinal gyrus
nTPM: 30.2
1847 Female, age 91, left hemisphere 30.9
2521 Female, age 94, right hemisphere 30.6
1841 Female, age 85, right hemisphere 30.5
1794 Male, age 80, right hemisphere 29.9
2848 Male, age 76, right hemisphere 29.1
Subiculum
nTPM: 29.4
2729 Female, age 91, right hemisphere 32.1
1977 Female, age 85, both hemispheres 31.2
1901 Male, age 80, both hemispheres 30.9
2619 Male, age 74, both hemispheres 30.4
2438 Female, age 94, left hemisphere 27.0
2042 Male, age 76, both hemispheres 25.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.0
Samples: 197

Max nTPM: 53.2
Min nTPM: 9.6
Std nTPM: 8.2
Median nTPM: 27.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 53.2
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 51.6
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 49.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 47.4
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 46.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 45.2
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 43.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 42.7
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 42.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 41.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 41.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 83.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 83.9
FF:10153-102I9 76 years, female 103.1
FF:10169-103B7 60 years, female 64.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 79.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 79.5
Samples: 4

Max nTPM: 87.7
Min nTPM: 74.4
Sample A Female 87.7
Sample B Female 76.5
Sample C Male 79.4
Sample D Male 74.4
Entorhinal cortex
nTPM: 74.8
Samples: 4

Max nTPM: 80.0
Min nTPM: 66.4
Sample A Female 77.8
Sample B Female 80.0
Sample C Male 74.8
Sample D Male 66.4
Subiculum
nTPM: 72.7
Samples: 4

Max nTPM: 84.7
Min nTPM: 67.4
Sample A Female 84.7
Sample B Female 70.9
Sample C Male 67.4
Sample D Male 67.9
Ventral hippocampus
nTPM: 72.6
Samples: 4

Max nTPM: 79.3
Min nTPM: 67.6
Sample A Female 71.3
Sample B Female 67.6
Sample C Male 72.0
Sample D Male 79.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 74.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 72.1
Samples: 4

Max nTPM: 77.4
Min nTPM: 68.4
Sample A Male 69.9
Sample B Male 68.4
Sample C Female 72.6
Sample D Female 77.4
Hippocampal formation
nTPM: 74.9
Samples: 4

Max nTPM: 79.8
Min nTPM: 65.8
Sample A Male 65.8
Sample B Male 79.8
Sample C Female 76.8
Sample D Female 77.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.8
2278 Antisense, RP_Baylor_102834, Mouse strain C57BL/6J (56 days, male) 6.8
2277 Antisense, RP_Baylor_102834, Mouse strain C57BL/6J (56 days, male) 6.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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