HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:32.0 nTPM
HPA:32.0 nTPM
GTEx:30.0 nTPM
FANTOM5:12.3 Scaled Tags Per Million
Mouse:0.0 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.0
Sample id Sample description nTPM
Hippocampus
nTPM: 30.5
2529 Female, age 94, left hemisphere 33.3
1911 Female, age 85, right hemisphere 32.2
1855 Male, age 76, left hemisphere 30.3
2148 Female, age 91, left hemisphere 29.5
1898 Male, age 80, left hemisphere 29.0
2621 Female, age 67, right hemisphere 28.8
Dentate gyrus
nTPM: 31.2
2530 Female, age 94, left hemisphere 33.8
2010 Male, age 76, both hemispheres 32.2
2246 Female, age 85, both hemispheres 31.9
2528 Male, age 74, both hemispheres 31.4
2531 Female, age 67, both hemispheres 29.5
1927 Female, age 91, both hemispheres 28.7
Entorhinal gyrus
nTPM: 30.8
2686 Male, age 75, right hemisphere 32.7
2613 Female, age 94, left hemisphere 31.8
2764 Male, age 80, right hemisphere 31.6
2117 Female, age 91, right hemisphere 30.5
1938 Female, age 85, left hemisphere 29.1
1787 Male, age 76, left hemisphere 28.9
Hippocampus, CA1
nTPM: 30.8
2082 Female, age 91, right hemisphere 39.7
1873 Female, age 85, both hemispheres 30.0
2527 Male, age 74, both hemispheres 29.7
2749 Male, age 80, left hemisphere 27.3
2045 Male, age 76, both hemispheres 27.0
Hippocampus, CA2
nTPM: 31.8
2113 Female, age 91, right hemisphere 34.1
2249 Male, age 74, both hemispheres 33.3
2437 Female, age 94, left hemisphere 32.8
1940 Female, age 85, left hemisphere 31.9
1963 Male, age 80, left hemisphere 31.3
1892 Male, age 76, both hemispheres 27.4
Hippocampus, CA3
nTPM: 29.0
1891 Female, age 85, both hemispheres 32.3
2861 Female, age 67, both hemispheres 29.2
2620 Female, age 94, left hemisphere 29.1
1867 Male, age 76, both hemispheres 29.0
2137 Male, age 80, left hemisphere 27.6
2436 Male, age 74, both hemispheres 26.9
Parahippocampal cortex
nTPM: 29.4
2692 Male, age 74, both hemispheres 32.8
2018 Male, age 76, both hemispheres 32.0
1990 Female, age 91, right hemisphere 30.9
2622 Female, age 67, right hemisphere 29.7
1850 Male, age 80, both hemispheres 29.0
2693 Female, age 94, both hemispheres 28.6
2532 Female, age 72, left hemisphere 28.3
2245 Female, age 91, both hemispheres 28.1
1933 Female, age 85, both hemispheres 27.6
2250 Female, age 67, right hemisphere 27.2
Perirhinal gyrus
nTPM: 27.3
2521 Female, age 94, right hemisphere 28.8
1794 Male, age 80, right hemisphere 28.0
1847 Female, age 91, left hemisphere 27.0
2848 Male, age 76, right hemisphere 27.0
1841 Female, age 85, right hemisphere 25.8
Subiculum
nTPM: 32.0
2042 Male, age 76, both hemispheres 34.4
2729 Female, age 91, right hemisphere 33.3
1901 Male, age 80, both hemispheres 32.6
2619 Male, age 74, both hemispheres 32.1
2438 Female, age 94, left hemisphere 30.3
1977 Female, age 85, both hemispheres 29.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.0
Samples: 197

Max nTPM: 79.3
Min nTPM: 2.7
Std nTPM: 13.3
Median nTPM: 27.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 79.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 76.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 76.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 71.7
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 66.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 64.3
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 58.8
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 57.6
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 56.4
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 53.8
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 51.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.3
FF:10153-102I9 76 years, female 16.4
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0
Hippocampal formation
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Male 0.1
Sample B Male 0.1
Sample C Female 0.0
Sample D Female 0.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
70611120 Antisense, RP_050630_02_A07, Mouse strain C57BL/6J (56 days, male) 0.2
72076545 Antisense, RP_051012_04_D04, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.