HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:11.0 nTPM
HPA:11.0 nTPM
GTEx:13.1 nTPM
FANTOM5:16.2 Scaled Tags Per Million
Pig:10.4 nTPM
Mouse:67.9 nTPM
Allen mouse:8.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019911
Glial cells Low
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.0
Sample id Sample description nTPM
Hippocampus
nTPM: 10.5
2148 Female, age 91, left hemisphere 11.0
2621 Female, age 67, right hemisphere 10.6
1911 Female, age 85, right hemisphere 10.5
1855 Male, age 76, left hemisphere 10.4
1898 Male, age 80, left hemisphere 10.3
2529 Female, age 94, left hemisphere 10.2
Dentate gyrus
nTPM: 10.9
2531 Female, age 67, both hemispheres 11.8
2246 Female, age 85, both hemispheres 11.0
1927 Female, age 91, both hemispheres 10.9
2010 Male, age 76, both hemispheres 10.8
2528 Male, age 74, both hemispheres 10.8
2530 Female, age 94, left hemisphere 10.3
Entorhinal gyrus
nTPM: 10.5
2686 Male, age 75, right hemisphere 10.8
2613 Female, age 94, left hemisphere 10.7
2764 Male, age 80, right hemisphere 10.5
1787 Male, age 76, left hemisphere 10.4
1938 Female, age 85, left hemisphere 10.4
2117 Female, age 91, right hemisphere 10.3
Hippocampus, CA1
nTPM: 10.8
2045 Male, age 76, both hemispheres 11.2
2082 Female, age 91, right hemisphere 10.9
1873 Female, age 85, both hemispheres 10.8
2749 Male, age 80, left hemisphere 10.7
2527 Male, age 74, both hemispheres 10.4
Hippocampus, CA2
nTPM: 10.5
1940 Female, age 85, left hemisphere 10.8
2113 Female, age 91, right hemisphere 10.8
2249 Male, age 74, both hemispheres 10.8
1892 Male, age 76, both hemispheres 10.4
1963 Male, age 80, left hemisphere 10.3
2437 Female, age 94, left hemisphere 10.1
Hippocampus, CA3
nTPM: 11.0
2620 Female, age 94, left hemisphere 12.0
2861 Female, age 67, both hemispheres 11.2
1867 Male, age 76, both hemispheres 10.9
2137 Male, age 80, left hemisphere 10.9
1891 Female, age 85, both hemispheres 10.6
2436 Male, age 74, both hemispheres 10.5
Parahippocampal cortex
nTPM: 10.7
2622 Female, age 67, right hemisphere 11.0
2693 Female, age 94, both hemispheres 11.0
1933 Female, age 85, both hemispheres 10.7
2250 Female, age 67, right hemisphere 10.7
2532 Female, age 72, left hemisphere 10.7
1850 Male, age 80, both hemispheres 10.6
2245 Female, age 91, both hemispheres 10.6
2692 Male, age 74, both hemispheres 10.6
1990 Female, age 91, right hemisphere 10.4
2018 Male, age 76, both hemispheres 10.4
Perirhinal gyrus
nTPM: 11.0
2521 Female, age 94, right hemisphere 11.7
1841 Female, age 85, right hemisphere 11.2
2848 Male, age 76, right hemisphere 10.8
1794 Male, age 80, right hemisphere 10.7
1847 Female, age 91, left hemisphere 10.5
Subiculum
nTPM: 10.4
2729 Female, age 91, right hemisphere 11.0
2042 Male, age 76, both hemispheres 10.5
1901 Male, age 80, both hemispheres 10.3
1977 Female, age 85, both hemispheres 10.3
2619 Male, age 74, both hemispheres 10.3
2438 Female, age 94, left hemisphere 9.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.1
Samples: 197

Max nTPM: 51.4
Min nTPM: 4.3
Std nTPM: 5.8
Median nTPM: 11.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 51.4
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 34.6
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 31.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 30.8
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 29.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 28.1
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 27.9
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 24.4
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 23.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 23.8
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 23.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.2
FF:10153-102I9 76 years, female 20.0
FF:10169-103B7 60 years, female 12.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.1
Samples: 4

Max nTPM: 12.0
Min nTPM: 7.4
Sample A Female 7.4
Sample B Female 9.4
Sample C Male 7.7
Sample D Male 12.0
Entorhinal cortex
nTPM: 10.3
Samples: 4

Max nTPM: 10.9
Min nTPM: 9.5
Sample A Female 10.7
Sample B Female 9.5
Sample C Male 10.2
Sample D Male 10.9
Subiculum
nTPM: 8.6
Samples: 4

Max nTPM: 9.3
Min nTPM: 8.1
Sample A Female 8.5
Sample B Female 8.6
Sample C Male 8.1
Sample D Male 9.3
Ventral hippocampus
nTPM: 8.0
Samples: 4

Max nTPM: 8.8
Min nTPM: 6.7
Sample A Female 6.7
Sample B Female 8.8
Sample C Male 8.2
Sample D Male 8.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 67.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 67.9
Samples: 4

Max nTPM: 93.6
Min nTPM: 50.9
Sample A Male 62.1
Sample B Male 93.6
Sample C Female 50.9
Sample D Female 65.0
Hippocampal formation
nTPM: 39.7
Samples: 4

Max nTPM: 42.7
Min nTPM: 35.7
Sample A Male 42.7
Sample B Male 35.7
Sample C Female 40.3
Sample D Female 40.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.5
74003405 Antisense, RP_050725_01_B07, Mouse strain C57BL/6J (56 days, male) 8.5
70927831 Antisense, RP_050725_01_B07, Mouse strain C57BL/6J (56 days, male) 5.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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