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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:4300.7 nTPM
HPA:4300.7 nTPM
FANTOM5:0.3 Scaled Tags Per Million

MEDULLA OBLONGATA - Annotated protein expression
Pending normal tissue analysis

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 4300.7
Sample id Sample description nTPM
Area postrema
nTPM: 327.7
2306 Male, age 80, both hemispheres 629.6
2799 Male, age 61, both hemispheres 353.6
2054 Male, age 76, both hemispheres 0.0
Cuneate nuclei
nTPM: 1712.5
2376 Male, age 61, both hemispheres 4113.9
2131 Male, age 76, both hemispheres 646.8
2381 Male, age 80, both hemispheres 376.9
Dorsal medullary reticular nucleus
nTPM: 1194.8
2088 Male, age 76, both hemispheres 1911.3
2373 Male, age 61, both hemispheres 1673.2
2040 Female, age 85, both hemispheres 0.0
Dorsal motor vagal complex
nTPM: 1499.3
2797 Male, age 61, both hemispheres 4997.6
2807 Female, age 85, both hemispheres 2664.7
2185 Male, age 76, both hemispheres 1797.5
2000 Male, age 74, unknown 979.0
2133 Female, age 91, both hemispheres 879.3
2643 Male, age 74, both hemispheres 676.8
2813 Female, age 72, unknown 0.0
2844 Male, age 55, unknown 0.0
Gigantocellular reticular nuclei, medullary
nTPM: 3228.2
2314 Male, age 61, both hemispheres 6950.3
2310 Male, age 80, both hemispheres 5213.1
2387 Female, age 91, both hemispheres 4053.7
2022 Male, age 76, right hemisphere 3152.2
1876 Female, age 85, both hemispheres 0.0
2462 Male, age 74, both hemispheres 0.0
Gigantocellular reticular nuclei, pars
nTPM: 4300.7
2330 Male, age 80, both hemispheres 6819.6
2168 Male, age 76, both hemispheres 4641.1
2706 Male, age 80, both hemispheres 4477.0
2336 Male, age 61, both hemispheres 4404.9
2084 Female, age 85, both hemispheres 1160.9
Inferior olive
nTPM: 2453.0
2628 Female, age 91, both hemispheres 4132.0
2085 Female, age 85, both hemispheres 2603.6
2379 Male, age 80, both hemispheres 2166.6
2178 Male, age 61, both hemispheres 2156.2
2563 Male, age 74, both hemispheres 1206.4
Lateral medullary reticular nucleus
nTPM: 894.2
2804 Female, age 91, both hemispheres 1914.2
2374 Male, age 61, both hemispheres 1662.7
2190 Female, age 85, both hemispheres 1087.1
2305 Male, age 74, both hemispheres 701.4
2044 Male, age 76, both hemispheres 0.0
2852 Male, age 80, both hemispheres 0.0
Medial vestibular nucleus
nTPM: 1643.5
2803 Female, age 91, both hemispheres 4589.7
2093 Male, age 80, both hemispheres 3217.7
2624 Male, age 61, both hemispheres 2054.1
2134 Male, age 76, both hemispheres 0.0
2743 Female, age 85, both hemispheres 0.0
2801 Male, age 74, both hemispheres 0.0
Motor hypoglossal nucleus
nTPM: 1243.1
2132 Female, age 85, both hemispheres 3786.9
2125 Female, age 91, both hemispheres 1675.1
2182 Male, age 80, both hemispheres 753.5
2277 Male, age 76, both hemispheres 0.0
2461 Male, age 61, both hemispheres 0.0
Nucleus ambiguus
nTPM: 472.6
2071 Male, age 76, both hemispheres 945.3
2096 Female, age 85, both hemispheres 0.0
Nucleus cuneatus
nTPM: 1448.3
2805 Female, age 91, both hemispheres 3933.8
2100 Male, age 76, both hemispheres 2216.7
2808 Female, age 85, both hemispheres 1380.6
2562 Male, age 61, both hemispheres 1077.6
2380 Male, age 80, both hemispheres 81.3
2564 Male, age 74, both hemispheres 0.0
Nucleus gracilis
nTPM: 1022.5
2299 Female, age 85, both hemispheres 2951.6
2382 Male, age 80, both hemispheres 115.9
2627 Male, age 74, both hemispheres 0.0
Nucleus raphe magnus
nTPM: 3527.4
2328 Male, age 80, both hemispheres 5920.6
2455 Male, age 74, both hemispheres 4257.5
2172 Female, age 85, both hemispheres 4042.0
2459 Female, age 91, both hemispheres 3796.8
2160 Male, age 61, both hemispheres 2032.8
2051 Male, age 76, both hemispheres 1114.7
Nucleus raphe obscurus
nTPM: 2528.9
2845 Female, age 85, midline 3992.5
2800 Male, age 61, midline 3126.2
2142 Male, age 76, midline 468.1
Nucleus raphe pallidus
nTPM: 716.6
2145 Male, age 76, midline 2149.9
1924 Male, age 61, midline 0.0
2183 Male, age 80, midline 0.0
Nucleus tractus solitarii
nTPM: 528.5
2191 Female, age 85, both hemispheres 1240.0
2144 Female, age 91, right hemisphere 874.2
2307 Male, age 80, both hemispheres 0.0
2656 Male, age 76, both hemispheres 0.0
Parvicellular reticular nuclei
nTPM: 1469.3
2095 Male, age 76, both hemispheres 2413.3
2558 Male, age 74, both hemispheres 1614.1
2119 Male, age 80, both hemispheres 380.6
Parvicellular reticular nuclei, medullary
nTPM: 1302.1
2181 Male, age 80, left hemisphere 1648.9
2189 Female, age 91, both hemispheres 1244.2
2091 Female, age 85, both hemispheres 1013.3
Peritrigeminal nucleus
nTPM: 692.2
2136 Male, age 76, both hemispheres 1095.0
2179 Male, age 61, both hemispheres 981.6
2067 Female, age 85, both hemispheres 0.0
Prepositus hypoglossal nucleus
nTPM: 518.4
2855 Female, age 85, right hemisphere 1036.9
2086 Male, age 80, both hemispheres 0.0
Spinal trigeminal nucleus, caudal
nTPM: 1602.7
2312 Male, age 61, both hemispheres 3971.0
2308 Male, age 80, both hemispheres 2432.8
2447 Male, age 76, both hemispheres 932.2
2390 Female, age 91, both hemispheres 677.7
2642 Male, age 74, both hemispheres 0.0
Spinal trigeminal nucleus, interpolar
nTPM: 895.5
2389 Female, age 91, both hemispheres 2310.9
2625 Male, age 61, both hemispheres 1331.3
2033 Male, age 80, both hemispheres 509.3
2386 Female, age 85, both hemispheres 326.1
2066 Male, age 76, right hemisphere 0.0
Spinal vestibular nucleus
nTPM: 3380.0
2796 Male, age 61, both hemispheres 6191.5
2806 Female, age 85, both hemispheres 4780.0
2384 Male, age 74, both hemispheres 4246.8
2186 Female, age 91, both hemispheres 2491.7
2780 Male, age 80, both hemispheres 1346.3
2748 Male, age 76, both hemispheres 1224.0
Ventral medullary reticular nucleus
nTPM: 1540.4
2372 Male, age 61, both hemispheres 3080.8
2060 Male, age 76, both hemispheres 0.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 2103.6
2302 Female, age 91, both hemispheres 7582.8
2180 Male, age 61, both hemispheres 1669.9
2118 Male, age 80, both hemispheres 1265.4
1986 Male, age 76, both hemispheres 0.0
2741 Female, age 85, both hemispheres 0.0

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 0.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 0.3
FF:10155-103A2 76 years, female 0.8
FF:10038-101F2 18-64 years, mixed 0.3
FF:10174-103C3 60 years, female 0.0

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