COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Peripheral nerve/ganglion: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:10.7 nTPM
HPA:10.7 nTPM
GTEx:3.7 nTPM
FANTOM5:67.8 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA031743Antibody HPA031744
Endothelial cells MediumMedium
Glandular cells LowMedium
Peripheral nerve/ganglion LowHigh



COLON - HPA RNA-seqi
Average nTPM 10.7
overview
Male, age 54 		Colon sample 67
nTPM: 13.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 14.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 13.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 10.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 10.1
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 4.8
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 10.5
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 11.9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 7.1
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 12.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 13.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 9.6
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 6.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 3.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 2.4
Samples: 373

Max nTPM: 7.9
Min nTPM: 0.7
Std nTPM: 0.8
Median nTPM: 2.2
GTEX-Y5V6-1626-SM-4VDT2 60-69 years, male 7.9
GTEX-WH7G-1426-SM-4LVMU 40-49 years, male 6.0
GTEX-15FZZ-1826-SM-6LLJP 30-39 years, female 5.8
GTEX-13113-1426-SM-5EGHU 60-69 years, female 5.7
GTEX-VJYA-2126-SM-4KL1O 60-69 years, male 5.6
GTEX-WOFM-1926-SM-4OOSP 20-29 years, male 5.4
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 5.4
GTEX-15UF7-1326-SM-7KUKV 40-49 years, male 5.3
GTEX-W5WG-2026-SM-4LMIB 50-59 years, female 5.2
GTEX-X5EB-1126-SM-46MVV 40-49 years, male 4.7
GTEX-1C64O-2426-SM-7P8R3 60-69 years, male 4.6
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2.33.34.80.88.401234567891011
 		Colon - Transverse
Average nTPM: 3.7
Samples: 406

Max nTPM: 11.1
Min nTPM: 0.8
Std nTPM: 1.8
Median nTPM: 3.3
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 11.1
GTEX-14JIY-3326-SM-6871E 60-69 years, male 10.9
GTEX-144GM-1226-SM-5LU52 20-29 years, male 10.2
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 8.7
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 8.4
GTEX-1H11D-2626-SM-9JGH4 40-49 years, male 8.1
GTEX-1C475-1626-SM-731FP 40-49 years, female 8.0
GTEX-16AAH-1326-SM-7KFRG 50-59 years, male 7.8
GTEX-1RAZR-1926-SM-E6CRF 40-49 years, male 7.8
GTEX-14XAO-2026-SM-69LOI 60-69 years, female 7.7
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 7.6
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 67.8
FF:10014-101C5 62,83,84 years, mixed 67.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.