COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: High
Peripheral nerve/ganglion: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:40.0 nTPM
HPA:18.2 nTPM
GTEx:40.0 nTPM
FANTOM5:93.6 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA036462
Endothelial cells Medium
Glandular cells High
Peripheral nerve/ganglion High



COLON - HPA RNA-seqi
Average nTPM 18.2
overview
Male, age 54 		Colon sample 67
nTPM: 14.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 22.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 19.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 15.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 24.4
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 14.2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 16.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 21.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 15.9
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 17.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 18.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 15.3
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 20.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 40.0
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 40.0
Samples: 373

Max nTPM: 64.0
Min nTPM: 18.5
Std nTPM: 5.9
Median nTPM: 39.5
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 64.0
GTEX-15UF6-2726-SM-7KULY 70-79 years, female 60.4
GTEX-1H3VE-2326-SM-9KNVU 40-49 years, male 60.4
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 59.0
GTEX-1GL5R-1726-SM-9KNUX 50-59 years, male 58.1
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 57.4
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 56.5
GTEX-1A32A-2626-SM-73KX9 50-59 years, female 55.7
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 55.2
GTEX-13RTJ-1926-SM-5YYA2 60-69 years, male 55.0
GTEX-139UW-2326-SM-5KM1Y 60-69 years, male 54.5
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Colon - Transverse
Average nTPM: 36.4
Samples: 406

Max nTPM: 98.3
Min nTPM: 23.9
Std nTPM: 6.3
Median nTPM: 35.7
GTEX-14JIY-3326-SM-6871E 60-69 years, male 98.3
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 64.1
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 62.4
GTEX-1EH9U-2026-SM-7PBYS 60-69 years, male 54.6
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 50.0
GTEX-WVJS-2426-SM-EZ6LI 50-59 years, male 49.4
GTEX-1JN1M-2626-SM-CY8I3 60-69 years, female 49.0
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 48.7
GTEX-1GZ4H-1226-SM-9KNUA 50-59 years, female 48.7
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 48.6
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 48.6
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 93.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 93.6
FF:10014-101C5 62,83,84 years, mixed 93.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.