COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:81.6 nTPM
HPA:81.6 nTPM
GTEx:64.2 nTPM
FANTOM5:109.5 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA000867Antibody CAB004226
Endothelial cells LowNot detected
Glandular cells MediumHigh




COLON - HPA RNA-seqi
Average nTPM 81.6
overview
Male, age 54 		Colon sample 67
nTPM: 66
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 86
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 92.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 67.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 66.7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 80.8
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 90.3
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 89.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 70.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 105.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 104.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 77.7
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 63.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 64.2
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 64.2
Samples: 373

Max nTPM: 150.9
Min nTPM: 24.3
Std nTPM: 18.6
Median nTPM: 62.1
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 150.9
GTEX-14E1K-1626-SM-664MO 50-59 years, male 133.0
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 120.7
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 111.2
GTEX-1LSNM-1426-SM-E6CIH 50-59 years, male 109.8
GTEX-ZPIC-2626-SM-57WE2 40-49 years, female 109.3
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 109.2
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 108.8
GTEX-1J8Q3-2426-SM-CL53S 60-69 years, male 107.0
GTEX-1KANA-1726-SM-CY8IG 20-29 years, male 105.7
GTEX-15G1A-1926-SM-7KUFF 30-39 years, male 104.8
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Colon - Transverse
Average nTPM: 62.4
Samples: 406

Max nTPM: 143.0
Min nTPM: 29.5
Std nTPM: 15.6
Median nTPM: 61.9
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 143.0
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 122.3
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 114.4
GTEX-15DZA-0926-SM-69LQ3 30-39 years, female 110.9
GTEX-18QFQ-1526-SM-72D57 30-39 years, male 110.4
GTEX-1CB4I-2226-SM-7P8SL 50-59 years, male 106.4
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 101.6
GTEX-OXRO-0726-SM-E9U4C 60-69 years, female 99.0
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 95.8
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 95.6
GTEX-ZF29-1726-SM-4WKFV 60-69 years, female 94.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 109.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 109.5
FF:10014-101C5 62,83,84 years, mixed 109.5

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.