COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: High
Glandular cells: High
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:8.8 nTPM
HPA:8.6 nTPM
GTEx:8.8 nTPM
FANTOM5:11.9 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA002569
Endothelial cells High
Glandular cells High
Peripheral nerve/ganglion Medium


COLON - HPA RNA-seqi
Average nTPM 8.6
overview
Male, age 54 		Colon sample 67
nTPM: 7.5
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 10.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 9.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 6.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 4.9
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 8.9
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 11.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 8.7
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 7.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 9.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 9.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 8.2
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 9.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 8.8
GTEx sample id Sample description nTPM
6.47.69.12.613.00246810121416
 		Colon - Sigmoid
Average nTPM: 7.8
Samples: 373

Max nTPM: 16.9
Min nTPM: 2.6
Std nTPM: 2.0
Median nTPM: 7.6
GTEX-13OVI-2126-SM-5KM3U 60-69 years, female 16.9
GTEX-1H1ZS-2626-SM-9QEIX 70-79 years, male 15.9
GTEX-WY7C-1926-SM-4ONCI 50-59 years, male 14.7
GTEX-1E2YA-2526-SM-7IGOU 50-59 years, male 13.6
GTEX-1LKK1-2426-SM-DIPES 50-59 years, female 13.0
GTEX-1H3VE-2326-SM-9KNVU 40-49 years, male 12.5
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 12.4
GTEX-15RJE-2226-SM-6M46A 40-49 years, male 12.3
GTEX-117XS-2226-SM-5GIE1 60-69 years, male 11.9
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 11.9
GTEX-1H23P-2626-SM-9KNVN 60-69 years, male 11.8
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7.28.610.23.714.30246810121416
 		Colon - Transverse
Average nTPM: 8.8
Samples: 406

Max nTPM: 16.7
Min nTPM: 3.7
Std nTPM: 2.1
Median nTPM: 8.6
GTEX-UJMC-1326-SM-4IHLS 50-59 years, male 16.7
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 15.6
GTEX-14C39-1926-SM-5ZZW5 40-49 years, male 15.5
GTEX-1K2DA-2026-SM-CGQGK 50-59 years, male 15.3
GTEX-XPVG-1826-SM-4B64X 50-59 years, male 14.3
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 14.1
GTEX-11LCK-2026-SM-5A5MA 30-39 years, male 13.7
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 13.7
GTEX-1S3DN-1826-SM-EV79K 50-59 years, male 13.7
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 13.4
GTEX-ZLV1-1226-SM-4WWBX 60-69 years, female 13.4
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 11.9
FF:10014-101C5 62,83,84 years, mixed 11.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.