COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: High
Glandular cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:18.3 nTPM
HPA:11.3 nTPM
GTEx:18.3 nTPM
FANTOM5:25.6 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA039557
Endothelial cells High
Glandular cells Medium


COLON - HPA RNA-seqi
Average nTPM 11.3
overview
Male, age 54 		Colon sample 67
nTPM: 5.9
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 8.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 11.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 9.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 10.5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 12.7
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 14.5
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 15.7
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 9.8
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 15.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 9.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 7.9
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 15.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 18.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 16.7
Samples: 373

Max nTPM: 44.5
Min nTPM: 7.9
Std nTPM: 5.0
Median nTPM: 15.9
GTEX-1JN6P-2126-SM-ARL98 60-69 years, male 44.5
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 37.5
GTEX-1P4AB-2626-SM-DTXEU 50-59 years, male 32.9
GTEX-1LKK1-2426-SM-DIPES 50-59 years, female 32.5
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 32.4
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 30.2
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 29.5
GTEX-1GMRU-2626-SM-9WPPM 50-59 years, male 29.4
GTEX-183WM-2526-SM-731BP 70-79 years, female 29.3
GTEX-1PIIG-2126-SM-EXUSD 30-39 years, male 29.2
GTEX-1RDX4-1926-SM-E6CJJ 50-59 years, female 28.8
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Colon - Transverse
Average nTPM: 18.3
Samples: 406

Max nTPM: 44.9
Min nTPM: 7.1
Std nTPM: 5.0
Median nTPM: 18.1
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 44.9
GTEX-14C39-1926-SM-5ZZW5 40-49 years, male 43.8
GTEX-1F75B-2726-SM-7P8QO 50-59 years, male 43.3
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 37.7
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 35.4
GTEX-1HSMQ-2726-SM-C1YRE 50-59 years, male 33.3
GTEX-YEC3-2426-SM-DO11A 50-59 years, male 32.7
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 31.4
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 29.8
GTEX-SNOS-1226-SM-4DM5H 40-49 years, male 29.3
GTEX-1L5NE-2026-SM-CXZKR 50-59 years, male 29.0
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 25.6
FF:10014-101C5 62,83,84 years, mixed 25.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.