COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:4.5 nTPM
HPA:3.0 nTPM
GTEx:4.5 nTPM
FANTOM5:9.4 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - Antibody stainingi
Antibody HPA042887
Endothelial cells Medium
Glandular cells Medium
Peripheral nerve/ganglion Low


COLON - HPA RNA-seqi
Average nTPM 3.0
overview
Male, age 54 		Colon sample 67
nTPM: 2.4
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 2.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 2.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 4.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 2.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 3.8
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 2.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 3.5
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 3.3
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 1.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 3.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 2.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 3.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 4.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 4.5
Samples: 373

Max nTPM: 23.5
Min nTPM: 1.1
Std nTPM: 2.1
Median nTPM: 4.2
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 23.5
GTEX-1P4AB-2626-SM-DTXEU 50-59 years, male 15.7
GTEX-15F5U-1426-SM-7KUN2 40-49 years, male 11.4
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 11.1
GTEX-16Z82-2426-SM-7KUMS 60-69 years, male 10.7
GTEX-1IL2U-2526-SM-C1YQV 60-69 years, male 10.6
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 10.4
GTEX-1HB9E-2526-SM-D4P35 50-59 years, male 10.4
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 9.7
GTEX-1LSVX-2026-SM-E9TJD 60-69 years, male 9.7
GTEX-1CB4G-2726-SM-79OO4 60-69 years, male 9.5
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Colon - Transverse
Average nTPM: 4.5
Samples: 406

Max nTPM: 15.6
Min nTPM: 1.0
Std nTPM: 2.1
Median nTPM: 3.9
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 15.6
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 13.0
GTEX-WVJS-2426-SM-EZ6LI 50-59 years, male 12.3
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 12.2
GTEX-1C6VQ-2726-SM-73KUL 50-59 years, male 11.5
GTEX-15CHQ-2526-SM-6EU24 60-69 years, male 11.1
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 10.8
GTEX-1LSVX-1726-SM-DHXJP 60-69 years, male 10.6
GTEX-OXRO-0726-SM-E9U4C 60-69 years, female 10.5
GTEX-1ICLZ-2426-SM-CKZOD 60-69 years, male 10.3
GTEX-R45C-2126-SM-EZ6KZ 60-69 years, female 10.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 9.4
FF:10014-101C5 62,83,84 years, mixed 9.4

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.