COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:7.9 nTPM
HPA:1.0 nTPM
GTEx:7.9 nTPM
FANTOM5:4.5 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 1.0
overview
Male, age 54 		Colon sample 67
nTPM: 0.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 0.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 0.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 0.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 0.9
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 1.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 0.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 1.8
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 1
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 0.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 0.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 0.9
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 2.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 7.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 7.9
Samples: 373

Max nTPM: 38.7
Min nTPM: 1.2
Std nTPM: 5.1
Median nTPM: 6.7
GTEX-15RJE-2226-SM-6M46A 40-49 years, male 38.7
GTEX-17HG3-1126-SM-7DUFC 30-39 years, female 38.3
GTEX-1PIIG-2126-SM-EXUSD 30-39 years, male 36.6
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 31.2
GTEX-145LS-2926-SM-5O99G 60-69 years, female 23.5
GTEX-1QCLY-2026-SM-EVR4C 30-39 years, male 20.5
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 20.3
GTEX-1LG7Y-2226-SM-E9U5K 50-59 years, male 19.6
GTEX-1LSNL-1626-SM-E9TJY 50-59 years, male 19.6
GTEX-183WM-2526-SM-731BP 70-79 years, female 19.4
GTEX-1JMQJ-2626-SM-CY8HQ 50-59 years, male 19.3
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Colon - Transverse
Average nTPM: 4.8
Samples: 406

Max nTPM: 33.7
Min nTPM: 0.3
Std nTPM: 3.8
Median nTPM: 3.6
GTEX-WVJS-2426-SM-EZ6LI 50-59 years, male 33.7
GTEX-1EMGI-2726-SM-7P8S4 60-69 years, male 29.7
GTEX-15SHU-2526-SM-6M47D 40-49 years, female 27.1
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 20.8
GTEX-16MT8-2726-SM-7IGLJ 60-69 years, female 20.4
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 17.7
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 15.5
GTEX-1EH9U-2026-SM-7PBYS 60-69 years, male 15.3
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 15.2
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 15.0
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 15.0
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 4.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 4.5
FF:10014-101C5 62,83,84 years, mixed 4.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.