COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:36.4 nTPM
HPA:26.5 nTPM
GTEx:36.4 nTPM
FANTOM5:71.7 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA043487
Endothelial cells Medium
Glandular cells Medium
Peripheral nerve/ganglion Not detected


COLON - HPA RNA-seqi
Average nTPM 26.5
overview
Male, age 54 		Colon sample 67
nTPM: 22.3
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 45.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 45.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 45.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 62.2
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 19.9
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 19.4
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 15.8
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 11.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 15.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 10.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 15.9
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 14.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 36.4
GTEx sample id Sample description nTPM
28.535.042.113.862.501020304050607080
 		Colon - Sigmoid
Average nTPM: 36.4
Samples: 373

Max nTPM: 86.1
Min nTPM: 13.8
Std nTPM: 11.6
Median nTPM: 35.0
GTEX-1GZ4H-1326-SM-7P8TE 50-59 years, female 86.1
GTEX-1EH9U-1926-SM-7P8QM 60-69 years, male 84.9
GTEX-15RJE-2226-SM-6M46A 40-49 years, male 72.8
GTEX-1HSEH-1926-SM-A96SB 60-69 years, male 70.1
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 65.7
GTEX-1EMGI-2626-SM-7IGNR 60-69 years, male 64.8
GTEX-1F5PK-1726-SM-7RHHW 50-59 years, male 63.9
GTEX-1E2YA-2526-SM-7IGOU 50-59 years, male 63.1
GTEX-1R9JW-2126-SM-E76QT 30-39 years, female 62.5
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 62.4
GTEX-1GMR2-1826-SM-9KNUP 50-59 years, male 62.3
Show allShow less
23.628.434.511.050.101020304050607080
 		Colon - Transverse
Average nTPM: 29.9
Samples: 406

Max nTPM: 89.2
Min nTPM: 11.0
Std nTPM: 9.5
Median nTPM: 28.4
GTEX-U412-1726-SM-EZ6KX 60-69 years, male 89.2
GTEX-WVJS-2426-SM-EZ6LI 50-59 years, male 85.6
GTEX-17MF6-2426-SM-7LTAM 40-49 years, male 70.3
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 69.7
GTEX-1EMGI-2726-SM-7P8S4 60-69 years, male 58.2
GTEX-16NPV-2626-SM-6M484 50-59 years, female 56.8
GTEX-15ER7-2926-SM-7KUFK 20-29 years, female 56.4
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 54.6
GTEX-1GL5R-2426-SM-7MXV1 50-59 years, male 54.1
GTEX-1EH9U-2026-SM-7PBYS 60-69 years, male 53.2
GTEX-15G1A-1826-SM-7KUKO 30-39 years, male 52.3
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 71.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 71.7
FF:10014-101C5 62,83,84 years, mixed 71.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.