COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:58.8 nTPM
HPA:29.5 nTPM
GTEx:58.8 nTPM
FANTOM5:46.1 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 29.5
overview
Male, age 54 		Colon sample 67
nTPM: 32.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 34.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 32.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 32.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 32.5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 28
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 17.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 29.3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 22.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 34.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 25.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 31.7
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 30.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 58.8
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 58.8
Samples: 373

Max nTPM: 127.4
Min nTPM: 36.7
Std nTPM: 9.5
Median nTPM: 58.1
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 127.4
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 87.1
GTEX-1RQEC-2626-SM-EVR3Z 60-69 years, male 82.2
GTEX-1JN6P-2126-SM-ARL98 60-69 years, male 81.5
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 81.3
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 80.6
GTEX-1HSEH-1926-SM-A96SB 60-69 years, male 80.6
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 78.7
GTEX-1HCU6-2926-SM-B2LWV 60-69 years, female 78.2
GTEX-16XZZ-2726-SM-7EWDO 60-69 years, male 77.6
GTEX-1LSNL-1626-SM-E9TJY 50-59 years, male 77.6
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Colon - Transverse
Average nTPM: 51.0
Samples: 406

Max nTPM: 83.9
Min nTPM: 31.2
Std nTPM: 7.5
Median nTPM: 50.7
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 83.9
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 81.1
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 76.0
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 71.4
GTEX-13X6H-1926-SM-7EWD3 50-59 years, female 69.4
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 69.4
GTEX-14PJ3-0926-SM-69LQG 50-59 years, male 69.1
GTEX-1IKOE-2026-SM-AHZ31 30-39 years, female 69.0
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 68.9
GTEX-SNOS-1226-SM-4DM5H 40-49 years, male 67.5
GTEX-11GSP-1626-SM-5986N 60-69 years, female 67.2
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 46.1
FF:10014-101C5 62,83,84 years, mixed 46.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.