COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:50.8 nTPM
HPA:6.9 nTPM
GTEx:50.8 nTPM
FANTOM5:18.0 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 6.9
overview
Male, age 54 		Colon sample 67
nTPM: 6.3
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 5.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 3.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 7.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 11.6
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 8.4
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 5
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 9.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 4.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 7.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 4.7
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 8.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 50.8
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 50.8
Samples: 373

Max nTPM: 288.5
Min nTPM: 4.1
Std nTPM: 31.5
Median nTPM: 43.2
GTEX-15RJE-2226-SM-6M46A 40-49 years, male 288.5
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 181.0
GTEX-1HCU6-2926-SM-B2LWV 60-69 years, female 169.4
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 164.9
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 141.9
GTEX-16NGA-0926-SM-718AG 40-49 years, female 139.8
GTEX-17HG3-1126-SM-7DUFC 30-39 years, female 129.3
GTEX-1LSNL-1626-SM-E9TJY 50-59 years, male 128.7
GTEX-183WM-2526-SM-731BP 70-79 years, female 126.6
GTEX-1RQEC-2626-SM-EVR3Z 60-69 years, male 124.0
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 121.5
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Colon - Transverse
Average nTPM: 26.9
Samples: 406

Max nTPM: 178.4
Min nTPM: 1.4
Std nTPM: 23.8
Median nTPM: 19.1
GTEX-WVJS-2426-SM-EZ6LI 50-59 years, male 178.4
GTEX-15SHU-2526-SM-6M47D 40-49 years, female 154.6
GTEX-14C5O-2526-SM-73KU2 60-69 years, male 126.2
GTEX-1HCU7-2626-SM-C1YQO 50-59 years, male 100.7
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 100.2
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 96.2
GTEX-1HCU6-2726-SM-A9SKV 60-69 years, female 94.7
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 93.5
GTEX-1EMGI-2726-SM-7P8S4 60-69 years, male 93.4
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 92.1
GTEX-16Z82-2226-SM-6LPJ7 60-69 years, male 90.4
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 18.0
FF:10014-101C5 62,83,84 years, mixed 18.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.