COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Not detected
Peripheral nerve/ganglion: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:8.1 nTPM
HPA:8.1 nTPM
GTEx:2.7 nTPM
FANTOM5:18.8 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA011046Antibody HPA011069
Endothelial cells Not detectedLow
Glandular cells Not detectedLow
Peripheral nerve/ganglion LowLow




COLON - HPA RNA-seqi
Average nTPM 8.1
overview
Male, age 54 		Colon sample 67
nTPM: 8.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 8.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 7.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 3.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 8.9
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 5.4
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 7.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 8.3
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 12.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 7.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 10
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 10.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 2.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 2.5
Samples: 373

Max nTPM: 8.0
Min nTPM: 0.6
Std nTPM: 0.7
Median nTPM: 2.5
GTEX-VJYA-2126-SM-4KL1O 60-69 years, male 8.0
GTEX-1HCU7-2726-SM-A9G3D 50-59 years, male 5.6
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 5.4
GTEX-1HBPI-2226-SM-9WYTY 50-59 years, male 4.9
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 4.2
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 4.0
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 3.9
GTEX-16NGA-0926-SM-718AG 40-49 years, female 3.9
GTEX-15F5U-1426-SM-7KUN2 40-49 years, male 3.7
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 3.7
GTEX-YF7O-1626-SM-5IFII 50-59 years, male 3.7
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Colon - Transverse
Average nTPM: 2.7
Samples: 406

Max nTPM: 11.1
Min nTPM: 0.5
Std nTPM: 1.2
Median nTPM: 2.4
GTEX-14ICK-1026-SM-6AJA4 40-49 years, male 11.1
GTEX-15DYW-2326-SM-6PAMU 60-69 years, female 9.3
GTEX-1KANB-1526-SM-CXZK4 50-59 years, male 8.7
GTEX-16XZZ-2626-SM-6M47S 60-69 years, male 8.2
GTEX-147GR-2726-SM-664OO 60-69 years, male 7.8
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 7.3
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 7.3
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 6.9
GTEX-144GL-2526-SM-5TDDL 50-59 years, male 6.7
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 6.4
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 6.3
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 18.8
FF:10014-101C5 62,83,84 years, mixed 18.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.