COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:35.0 nTPM
HPA:3.9 nTPM
GTEx:35.0 nTPM
FANTOM5:43.1 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA065375
Endothelial cells Low
Glandular cells High



COLON - HPA RNA-seqi
Average nTPM 3.9
overview
Male, age 54 		Colon sample 67
nTPM: 4
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 3.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 3.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 1.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 1.8
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 5.8
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 2
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 4.9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 6.3
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 3.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 4.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 3.9
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 6.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 35.0
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 35.0
Samples: 373

Max nTPM: 67.3
Min nTPM: 11.5
Std nTPM: 10.7
Median nTPM: 34.0
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 67.3
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 66.9
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 66.7
GTEX-1QCLZ-2026-SM-EAZ4A 60-69 years, female 61.0
GTEX-1HSEH-1926-SM-A96SB 60-69 years, male 60.7
GTEX-1GF9X-1426-SM-7RHGX 40-49 years, female 60.4
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 60.3
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 58.5
GTEX-1GZ4H-1326-SM-7P8TE 50-59 years, female 57.1
GTEX-17HGU-2626-SM-79OKN 50-59 years, male 55.6
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 55.4
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Colon - Transverse
Average nTPM: 23.0
Samples: 406

Max nTPM: 58.6
Min nTPM: 6.0
Std nTPM: 8.3
Median nTPM: 21.5
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 58.6
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 57.1
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 48.5
GTEX-16NPV-2626-SM-6M484 50-59 years, female 47.7
GTEX-14C39-1926-SM-5ZZW5 40-49 years, male 46.6
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 43.8
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 43.1
GTEX-18D9B-2526-SM-718BN 60-69 years, male 43.0
GTEX-11GSP-1626-SM-5986N 60-69 years, female 42.8
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 41.9
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 41.2
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 43.1
FF:10014-101C5 62,83,84 years, mixed 43.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.