COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:11.7 nTPM
HPA:11.3 nTPM
GTEx:11.7 nTPM
FANTOM5:16.6 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA038337Antibody CAB010421Antibody CAB018545
Endothelial cells MediumLowMedium
Glandular cells LowMediumMedium
Peripheral nerve/ganglion MediumMediumLow







COLON - HPA RNA-seqi
Average nTPM 11.3
overview
Male, age 54 		Colon sample 67
nTPM: 13
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 16.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 18.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 10.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 13.7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 8
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 7.3
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 9.7
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 8.6
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 10.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 10.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 11.3
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 8.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 11.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 11.7
Samples: 373

Max nTPM: 22.3
Min nTPM: 3.4
Std nTPM: 2.5
Median nTPM: 11.4
GTEX-1S5ZA-1426-SM-E6CJQ 20-29 years, male 22.3
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 20.8
GTEX-144GM-1126-SM-79OJK 20-29 years, male 20.8
GTEX-YFCO-1526-SM-5YYB8 40-49 years, male 19.6
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 19.3
GTEX-1H3VE-2326-SM-9KNVU 40-49 years, male 19.3
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 19.2
GTEX-1LB8K-2526-SM-DIPEQ 50-59 years, male 18.1
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 18.0
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 17.7
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 17.3
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Colon - Transverse
Average nTPM: 10.8
Samples: 406

Max nTPM: 23.7
Min nTPM: 6.1
Std nTPM: 2.1
Median nTPM: 10.6
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 23.7
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 23.1
GTEX-14C5O-2526-SM-73KU2 60-69 years, male 19.5
GTEX-1ICLZ-2426-SM-CKZOD 60-69 years, male 18.6
GTEX-14JIY-3326-SM-6871E 60-69 years, male 17.2
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 16.5
GTEX-ZF29-1726-SM-4WKFV 60-69 years, female 16.4
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 16.2
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 16.1
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 15.9
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 15.8
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 16.6
FF:10014-101C5 62,83,84 years, mixed 16.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.