COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:2.4 nTPM
HPA:2.4 nTPM
GTEx:2.3 nTPM
FANTOM5:4.5 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - Antibody stainingi
Antibody HPA055998
Endothelial cells Low
Glandular cells Medium
Peripheral nerve/ganglion Not detected

COLON - HPA RNA-seqi
Average nTPM 2.4
overview
Male, age 54 		Colon sample 67
nTPM: 2.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 4.2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 3.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 2.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 1.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 1.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 3.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 1.4
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 2.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 3.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 1.6
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 1.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 2.3
GTEx sample id Sample description nTPM
1.52.12.80.54.70.00.51.01.52.02.53.03.54.04.55.05.56.0
 		Colon - Sigmoid
Average nTPM: 2.3
Samples: 373

Max nTPM: 6.3
Min nTPM: 0.5
Std nTPM: 1.0
Median nTPM: 2.1
GTEX-1LGOU-1726-SM-D3L8P 20-29 years, female 6.3
GTEX-1H1ZS-2626-SM-9QEIX 70-79 years, male 6.1
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 6.0
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 5.9
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 5.8
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 5.5
GTEX-1PBJI-2526-SM-E6CP4 20-29 years, female 5.4
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 5.3
GTEX-1HCU6-2926-SM-B2LWV 60-69 years, female 5.3
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 5.2
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 5.1
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1.52.12.80.54.60.00.51.01.52.02.53.03.54.04.55.05.56.06.5
 		Colon - Transverse
Average nTPM: 2.3
Samples: 406

Max nTPM: 6.8
Min nTPM: 0.5
Std nTPM: 0.9
Median nTPM: 2.1
GTEX-14C39-1926-SM-5ZZW5 40-49 years, male 6.8
GTEX-XUZC-1326-SM-4BRV2 30-39 years, female 6.0
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 5.7
GTEX-1K9T9-2826-SM-D4P3F 50-59 years, female 4.9
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 4.8
GTEX-139TS-1926-SM-5IJFO 60-69 years, male 4.8
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 4.8
GTEX-S4P3-1226-SM-4AD4Y 50-59 years, female 4.6
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 4.5
GTEX-147F3-1926-SM-5SIB9 50-59 years, female 4.5
GTEX-1B996-2626-SM-73KZ1 60-69 years, male 4.5
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 4.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 4.5
FF:10014-101C5 62,83,84 years, mixed 4.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.