COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:158.8 nTPM
HPA:100.6 nTPM
GTEx:158.8 nTPM
FANTOM5:79.3 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA044578Antibody HPA061919
Endothelial cells MediumNot detected
Glandular cells MediumLow
Peripheral nerve/ganglion -Low





COLON - HPA RNA-seqi
Average nTPM 100.6
overview
Male, age 54 		Colon sample 67
nTPM: 90.3
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 82.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 90.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 105.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 82.9
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 139.8
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 100.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 86.8
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 111.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 127.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 94.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 104.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 91
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 158.8
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 158.8
Samples: 373

Max nTPM: 333.1
Min nTPM: 28.2
Std nTPM: 58.7
Median nTPM: 151.4
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 333.1
GTEX-13OVI-2126-SM-5KM3U 60-69 years, female 327.9
GTEX-15G1A-1926-SM-7KUFF 30-39 years, male 317.7
GTEX-1LSNM-1426-SM-E6CIH 50-59 years, male 312.9
GTEX-15UF7-1326-SM-7KUKV 40-49 years, male 310.9
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 301.9
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 294.1
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 293.3
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 289.3
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 288.0
GTEX-12BJ1-2026-SM-5FQUH 60-69 years, male 284.8
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Colon - Transverse
Average nTPM: 128.1
Samples: 406

Max nTPM: 310.2
Min nTPM: 50.3
Std nTPM: 38.8
Median nTPM: 120.6
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 310.2
GTEX-18QFQ-1526-SM-72D57 30-39 years, male 269.4
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 264.0
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 260.7
GTEX-1MUQO-2626-SM-EWRO3 60-69 years, male 254.6
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 253.2
GTEX-1GL5R-2426-SM-7MXV1 50-59 years, male 244.4
GTEX-14PJ5-0926-SM-6LLIK 60-69 years, female 241.0
GTEX-1C2JI-1626-SM-7EPHC 50-59 years, male 230.2
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 229.2
GTEX-ZF29-1726-SM-4WKFV 60-69 years, female 225.9
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 79.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 79.3
FF:10014-101C5 62,83,84 years, mixed 79.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.