COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:15.2 nTPM
HPA:15.2 nTPM
GTEx:11.8 nTPM
FANTOM5:27.3 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA043900Antibody CAB004541
Endothelial cells MediumMedium
Glandular cells MediumHigh
Peripheral nerve/ganglion Medium-



COLON - HPA RNA-seqi
Average nTPM 15.2
overview
Male, age 54 		Colon sample 67
nTPM: 12.3
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 12.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 12.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 12.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 10.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 20.9
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 18.3
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 17.5
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 14.1
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 20.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 15.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 16.7
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 12.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 11.8
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 11.8
Samples: 373

Max nTPM: 21.3
Min nTPM: 3.7
Std nTPM: 3.5
Median nTPM: 11.9
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 21.3
GTEX-1F5PL-1926-SM-7MXTP 40-49 years, female 21.2
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 20.9
GTEX-YFCO-1526-SM-5YYB8 40-49 years, male 20.8
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 20.0
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 19.4
GTEX-15RIF-1426-SM-7KUKQ 20-29 years, male 19.3
GTEX-13D11-0626-SM-5LZYY 50-59 years, female 19.1
GTEX-1GL5R-1726-SM-9KNUX 50-59 years, male 19.1
GTEX-1RMOY-1726-SM-EVYC9 50-59 years, male 19.0
GTEX-ZLV1-1326-SM-DO11Q 60-69 years, female 18.7
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Colon - Transverse
Average nTPM: 11.1
Samples: 406

Max nTPM: 24.8
Min nTPM: 4.7
Std nTPM: 2.9
Median nTPM: 10.6
GTEX-1N2EF-1926-SM-DTX8M 60-69 years, male 24.8
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 23.1
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 19.2
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 18.7
GTEX-15CHC-1626-SM-5ZZWS 60-69 years, female 18.4
GTEX-1GL5R-2426-SM-7MXV1 50-59 years, male 18.4
GTEX-13X6H-1926-SM-7EWD3 50-59 years, female 17.8
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 17.8
GTEX-Q734-1126-SM-48TZY 40-49 years, female 17.7
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 17.6
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 17.5
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 27.3
FF:10014-101C5 62,83,84 years, mixed 27.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.