COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Not detected
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:32.9 nTPM
HPA:6.6 nTPM
GTEx:32.9 nTPM
FANTOM5:36.8 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA078486
Endothelial cells Not detected
Glandular cells Not detected
Peripheral nerve/ganglion Not detected



COLON - HPA RNA-seqi
Average nTPM 6.6
overview
Male, age 54 		Colon sample 67
nTPM: 4.6
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 2.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 0.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 2.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 3.5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 28.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 2.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 1.5
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 14
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 2.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 4.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 9.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 8.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 32.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 32.9
Samples: 373

Max nTPM: 77.6
Min nTPM: 1.1
Std nTPM: 12.7
Median nTPM: 32.8
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 77.6
GTEX-15G1A-1926-SM-7KUFF 30-39 years, male 74.9
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 73.5
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 70.7
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 68.8
GTEX-1KXAM-1926-SM-D3LAG 60-69 years, male 59.8
GTEX-1J8Q3-2426-SM-CL53S 60-69 years, male 58.9
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 58.0
GTEX-1JK1U-1426-SM-CNPOW 60-69 years, male 57.8
GTEX-16MTA-1626-SM-6M47N 50-59 years, male 57.2
GTEX-ZPIC-2626-SM-57WE2 40-49 years, female 56.6
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Colon - Transverse
Average nTPM: 15.6
Samples: 406

Max nTPM: 80.0
Min nTPM: 0.3
Std nTPM: 14.5
Median nTPM: 11.7
GTEX-1LVAN-2526-SM-CNPPC 50-59 years, female 80.0
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 58.0
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 55.7
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 55.4
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 54.3
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 53.8
GTEX-WY7C-1626-SM-4ONC8 50-59 years, male 52.7
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 52.2
GTEX-15CHC-1626-SM-5ZZWS 60-69 years, female 51.7
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 50.7
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 50.2
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 36.8
FF:10014-101C5 62,83,84 years, mixed 36.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.