COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:8.5 nTPM
HPA:3.2 nTPM
GTEx:8.5 nTPM
FANTOM5:19.0 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 3.2
overview
Male, age 54 		Colon sample 67
nTPM: 4.6
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 3.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 2.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 1.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 5.2
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 2.7
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 1.4
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 2.5
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 3.4
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 3.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 2
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 6
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 8.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 8.5
Samples: 373

Max nTPM: 17.4
Min nTPM: 0.4
Std nTPM: 3.1
Median nTPM: 8.2
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 17.4
GTEX-1LB8K-2526-SM-DIPEQ 50-59 years, male 16.8
GTEX-1QP29-2526-SM-E6CQ3 50-59 years, male 16.6
GTEX-1H1ZS-2626-SM-9QEIX 70-79 years, male 16.4
GTEX-14JG6-1626-SM-5YYBC 30-39 years, female 16.2
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 16.1
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 15.8
GTEX-1I1GT-2026-SM-CKZPK 60-69 years, female 15.8
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 15.7
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 15.6
GTEX-139UW-2326-SM-5KM1Y 60-69 years, male 15.5
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Colon - Transverse
Average nTPM: 6.3
Samples: 406

Max nTPM: 15.8
Min nTPM: 1.1
Std nTPM: 2.4
Median nTPM: 5.9
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 15.8
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 15.2
GTEX-QLQ7-1126-SM-CYPRB 60-69 years, male 15.0
GTEX-18A7A-2226-SM-7LT8K 50-59 years, female 14.3
GTEX-1IDJF-1826-SM-CKZOE 20-29 years, male 13.8
GTEX-11GSP-1626-SM-5986N 60-69 years, female 13.2
GTEX-18D9B-2526-SM-718BN 60-69 years, male 13.2
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 13.2
GTEX-1A3MV-1126-SM-718BS 30-39 years, male 13.1
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 12.8
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 12.8
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 19.0
FF:10014-101C5 62,83,84 years, mixed 19.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.