HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:31.8 nTPM
HPA:31.8 nTPM
GTEx:33.0 nTPM
FANTOM5:130.8 Scaled Tags Per Million
Pig:49.7 nTPM
Mouse:53.6 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029606Antibody HPA029607
Glial cells LowLow
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.8
Sample id Sample description nTPM
Hippocampus
nTPM: 31.8
1898 Male, age 80, left hemisphere 33.1
2529 Female, age 94, left hemisphere 33.1
1855 Male, age 76, left hemisphere 32.6
2148 Female, age 91, left hemisphere 31.6
1911 Female, age 85, right hemisphere 30.6
2621 Female, age 67, right hemisphere 29.6
Dentate gyrus
nTPM: 29.6
2530 Female, age 94, left hemisphere 30.8
2010 Male, age 76, both hemispheres 30.7
2528 Male, age 74, both hemispheres 29.7
2246 Female, age 85, both hemispheres 29.2
2531 Female, age 67, both hemispheres 29.1
1927 Female, age 91, both hemispheres 28.1
Entorhinal gyrus
nTPM: 28.6
2117 Female, age 91, right hemisphere 33.7
1787 Male, age 76, left hemisphere 29.7
1938 Female, age 85, left hemisphere 28.0
2686 Male, age 75, right hemisphere 27.7
2764 Male, age 80, right hemisphere 27.3
2613 Female, age 94, left hemisphere 25.1
Hippocampus, CA1
nTPM: 29.8
2527 Male, age 74, both hemispheres 32.9
1873 Female, age 85, both hemispheres 30.6
2045 Male, age 76, both hemispheres 30.2
2082 Female, age 91, right hemisphere 28.5
2749 Male, age 80, left hemisphere 26.6
Hippocampus, CA2
nTPM: 30.7
2249 Male, age 74, both hemispheres 33.2
1940 Female, age 85, left hemisphere 30.6
1892 Male, age 76, both hemispheres 30.4
2437 Female, age 94, left hemisphere 30.4
2113 Female, age 91, right hemisphere 30.3
1963 Male, age 80, left hemisphere 29.0
Hippocampus, CA3
nTPM: 30.0
1867 Male, age 76, both hemispheres 33.2
2436 Male, age 74, both hemispheres 32.5
1891 Female, age 85, both hemispheres 31.5
2620 Female, age 94, left hemisphere 28.8
2861 Female, age 67, both hemispheres 28.2
2137 Male, age 80, left hemisphere 25.9
Parahippocampal cortex
nTPM: 28.5
2250 Female, age 67, right hemisphere 31.9
1990 Female, age 91, right hemisphere 29.8
2018 Male, age 76, both hemispheres 29.3
1850 Male, age 80, both hemispheres 29.0
2245 Female, age 91, both hemispheres 28.8
1933 Female, age 85, both hemispheres 27.8
2692 Male, age 74, both hemispheres 27.2
2693 Female, age 94, both hemispheres 27.1
2532 Female, age 72, left hemisphere 27.0
2622 Female, age 67, right hemisphere 26.9
Perirhinal gyrus
nTPM: 28.2
1847 Female, age 91, left hemisphere 29.1
2521 Female, age 94, right hemisphere 29.1
1841 Female, age 85, right hemisphere 28.8
1794 Male, age 80, right hemisphere 27.6
2848 Male, age 76, right hemisphere 26.6
Subiculum
nTPM: 30.6
2042 Male, age 76, both hemispheres 31.9
2729 Female, age 91, right hemisphere 31.8
2438 Female, age 94, left hemisphere 30.6
1901 Male, age 80, both hemispheres 30.4
2619 Male, age 74, both hemispheres 30.0
1977 Female, age 85, both hemispheres 28.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.0
Samples: 197

Max nTPM: 250.8
Min nTPM: 11.9
Std nTPM: 21.7
Median nTPM: 28.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 250.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 166.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 80.6
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 79.2
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 77.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 72.0
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 70.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 65.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 64.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 57.9
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 56.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 130.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 130.8
FF:10169-103B7 60 years, female 143.3
FF:10153-102I9 76 years, female 118.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 49.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 49.7
Samples: 4

Max nTPM: 81.4
Min nTPM: 30.0
Sample A Female 81.4
Sample B Female 56.1
Sample C Male 30.0
Sample D Male 31.2
Entorhinal cortex
nTPM: 16.0
Samples: 4

Max nTPM: 20.6
Min nTPM: 12.0
Sample A Female 15.1
Sample B Female 20.6
Sample C Male 16.2
Sample D Male 12.0
Subiculum
nTPM: 18.7
Samples: 4

Max nTPM: 21.4
Min nTPM: 17.0
Sample A Female 21.4
Sample B Female 17.7
Sample C Male 17.0
Sample D Male 18.6
Ventral hippocampus
nTPM: 38.4
Samples: 4

Max nTPM: 56.7
Min nTPM: 24.1
Sample A Female 56.7
Sample B Female 24.1
Sample C Male 41.9
Sample D Male 30.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 53.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 49.6
Samples: 4

Max nTPM: 54.8
Min nTPM: 43.0
Sample A Male 54.8
Sample B Male 49.8
Sample C Female 50.7
Sample D Female 43.0
Hippocampal formation
nTPM: 53.6
Samples: 4

Max nTPM: 60.2
Min nTPM: 48.8
Sample A Male 60.2
Sample B Male 48.8
Sample C Female 52.6
Sample D Female 52.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
583844 Antisense, RP_040831_01_A07, Mouse strain C57BL/6J (56 days, male) 0.3

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