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TMEM176A
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  • TMEM176A
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:203.1 nTPM
HPA:203.1 nTPM
GTEx:162.2 nTPM
FANTOM5:466.8 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA008770
Glandular cells High



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 203.1
overview
Male, age 65
Small intestine sample 232
nTPM: 140
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 271.4
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 193.5
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 207.3

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 162.2
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 162.2
Samples: 187

Max nTPM: 374.4
Min nTPM: 9.4
Std nTPM: 80.1
Median nTPM: 145.4
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 374.4
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 369.3
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 368.4
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 357.9
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 354.3
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 347.9
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 345.9
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 332.8
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 326.5
GTEX-14PN3-2026-SM-68729 60-69 years, female 319.6
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 316.8
GTEX-144GM-1026-SM-79OKU 20-29 years, male 315.5
GTEX-YFCO-1326-SM-664NV 40-49 years, male 315.5
GTEX-111YS-1426-SM-5GID8 60-69 years, male 306.2
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 305.7
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 302.3
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 299.8
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 297.0
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 288.8
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 282.6
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 268.3
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 266.8
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 263.4
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 261.9
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 259.8
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 258.3
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 256.9
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 251.8
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 250.6
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 248.9
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 245.2
GTEX-1122O-1326-SM-5H11F 60-69 years, female 239.4
GTEX-ZTSS-0926-SM-59865 40-49 years, male 239.2
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 235.2
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 233.5
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 231.3
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 230.4
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 230.0
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 227.8
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 225.5
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 223.0
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 220.3
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 217.4
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 217.3
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 214.5
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 209.1
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 207.2
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 205.0
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 204.6
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 202.8
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 202.1
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 200.2
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 199.6
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 198.7
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 192.7
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 191.6
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 190.4
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 188.1
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 187.9
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 186.6
GTEX-13113-1226-SM-5EGHT 60-69 years, female 183.9
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 183.5
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 183.5
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 182.6
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 178.0
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 177.4
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 175.3
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 174.7
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 174.1
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 173.6
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 173.4
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 172.8
GTEX-14PK6-1626-SM-6871I 70-79 years, female 172.7
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 172.3
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 170.7
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 169.0
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 164.9
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 164.6
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 164.3
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 164.0
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 160.9
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 159.9
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 159.9
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 157.9
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 157.7
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 155.8
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 153.0
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 149.4
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 149.4
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 149.0
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 147.5
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 147.3
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 146.6
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 145.4
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 144.3
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 142.6
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 142.6
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 142.3
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 142.1
GTEX-1C475-1426-SM-793CH 40-49 years, female 140.9
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 138.9
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 134.8
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 134.2
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 132.3
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 131.8
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 131.5
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 130.9
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 130.1
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 129.8
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 128.8
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 128.5
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 128.1
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 128.0
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 127.3
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 126.1
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 124.6
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 124.0
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 123.6
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 123.3
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 122.7
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 122.6
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 122.4
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 119.6
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 119.3
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 118.7
GTEX-14PKU-1626-SM-6871C 40-49 years, female 118.5
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 117.8
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 115.8
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 115.7
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 112.8
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 112.6
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 112.0
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 111.5
GTEX-1192X-2526-SM-59868 50-59 years, male 110.9
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 110.3
GTEX-13111-1426-SM-5DUW3 50-59 years, male 109.3
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 108.7
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 108.2
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 107.7
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 105.0
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 104.9
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 104.6
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 103.7
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 102.6
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 102.5
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 102.3
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 101.8
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 101.2
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 99.7
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 98.1
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 98.0
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 97.1
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 95.8
GTEX-183FY-1626-SM-793D8 20-29 years, male 94.7
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 94.2
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 92.1
GTEX-13O61-1326-SM-5KM31 60-69 years, male 91.4
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 90.2
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 88.2
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 87.1
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 86.9
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 82.0
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 81.6
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 79.2
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 76.0
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 68.9
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 68.3
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 65.0
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 61.2
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 59.4
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 57.9
GTEX-117YX-0326-SM-5GICL 50-59 years, male 57.6
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 55.9
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 55.0
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 54.6
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 54.2
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 53.3
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 53.2
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 52.3
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 50.7
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 49.4
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 49.2
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 46.9
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 43.1
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 36.0
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 33.6
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 9.4
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 466.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 466.8
FF:10024-101D6 15,40,85 years, mixed 466.8

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