HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:54.3 nTPM
HPA:54.3 nTPM
GTEx:51.2 nTPM
FANTOM5:49.3 Scaled Tags Per Million
Pig:39.3 nTPM
Mouse:91.5 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.3
Sample id Sample description nTPM
Hippocampus
nTPM: 52.2
1898 Male, age 80, left hemisphere 55.6
1855 Male, age 76, left hemisphere 52.6
2621 Female, age 67, right hemisphere 52.0
2148 Female, age 91, left hemisphere 51.7
2529 Female, age 94, left hemisphere 51.4
1911 Female, age 85, right hemisphere 50.1
Dentate gyrus
nTPM: 51.1
1927 Female, age 91, both hemispheres 53.7
2530 Female, age 94, left hemisphere 52.0
2010 Male, age 76, both hemispheres 51.3
2528 Male, age 74, both hemispheres 50.2
2246 Female, age 85, both hemispheres 50.1
2531 Female, age 67, both hemispheres 49.1
Entorhinal gyrus
nTPM: 52.3
2764 Male, age 80, right hemisphere 53.9
2613 Female, age 94, left hemisphere 53.6
1938 Female, age 85, left hemisphere 53.5
1787 Male, age 76, left hemisphere 52.0
2117 Female, age 91, right hemisphere 50.5
2686 Male, age 75, right hemisphere 50.3
Hippocampus, CA1
nTPM: 52.2
2749 Male, age 80, left hemisphere 59.8
1873 Female, age 85, both hemispheres 52.3
2045 Male, age 76, both hemispheres 51.0
2527 Male, age 74, both hemispheres 50.5
2082 Female, age 91, right hemisphere 47.5
Hippocampus, CA2
nTPM: 51.4
1892 Male, age 76, both hemispheres 55.3
1963 Male, age 80, left hemisphere 54.0
2437 Female, age 94, left hemisphere 51.6
2249 Male, age 74, both hemispheres 51.0
2113 Female, age 91, right hemisphere 49.1
1940 Female, age 85, left hemisphere 47.6
Hippocampus, CA3
nTPM: 53.0
2436 Male, age 74, both hemispheres 57.1
2137 Male, age 80, left hemisphere 54.5
2620 Female, age 94, left hemisphere 52.2
1867 Male, age 76, both hemispheres 51.9
2861 Female, age 67, both hemispheres 51.7
1891 Female, age 85, both hemispheres 50.6
Parahippocampal cortex
nTPM: 52.2
1850 Male, age 80, both hemispheres 54.9
2250 Female, age 67, right hemisphere 53.3
2245 Female, age 91, both hemispheres 53.2
1933 Female, age 85, both hemispheres 52.9
2622 Female, age 67, right hemisphere 52.8
2532 Female, age 72, left hemisphere 52.6
2692 Male, age 74, both hemispheres 52.0
2693 Female, age 94, both hemispheres 51.9
1990 Female, age 91, right hemisphere 49.7
2018 Male, age 76, both hemispheres 48.8
Perirhinal gyrus
nTPM: 54.3
1847 Female, age 91, left hemisphere 58.1
1841 Female, age 85, right hemisphere 55.1
1794 Male, age 80, right hemisphere 55.0
2521 Female, age 94, right hemisphere 52.2
2848 Male, age 76, right hemisphere 51.1
Subiculum
nTPM: 50.6
1901 Male, age 80, both hemispheres 53.2
1977 Female, age 85, both hemispheres 51.3
2619 Male, age 74, both hemispheres 50.9
2729 Female, age 91, right hemisphere 49.7
2042 Male, age 76, both hemispheres 49.4
2438 Female, age 94, left hemisphere 49.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 51.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 51.2
Samples: 197

Max nTPM: 79.9
Min nTPM: 30.2
Std nTPM: 9.6
Median nTPM: 50.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 79.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 79.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 75.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 74.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 71.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 71.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 69.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 67.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 67.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 67.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 66.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.3
FF:10169-103B7 60 years, female 57.5
FF:10153-102I9 76 years, female 41.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 39.3
Samples: 4

Max nTPM: 47.4
Min nTPM: 30.9
Sample A Female 47.4
Sample B Female 37.8
Sample C Male 41.1
Sample D Male 30.9
Entorhinal cortex
nTPM: 38.6
Samples: 4

Max nTPM: 40.9
Min nTPM: 33.5
Sample A Female 39.7
Sample B Female 40.9
Sample C Male 40.3
Sample D Male 33.5
Subiculum
nTPM: 36.9
Samples: 4

Max nTPM: 47.9
Min nTPM: 32.3
Sample A Female 47.9
Sample B Female 34.0
Sample C Male 32.3
Sample D Male 33.3
Ventral hippocampus
nTPM: 36.3
Samples: 4

Max nTPM: 45.3
Min nTPM: 26.7
Sample A Female 36.0
Sample B Female 26.7
Sample C Male 45.3
Sample D Male 37.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 91.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 86.7
Samples: 4

Max nTPM: 91.8
Min nTPM: 77.5
Sample A Male 89.6
Sample B Male 87.9
Sample C Female 91.8
Sample D Female 77.5
Hippocampal formation
nTPM: 91.5
Samples: 4

Max nTPM: 97.4
Min nTPM: 86.0
Sample A Male 97.4
Sample B Male 86.0
Sample C Female 95.6
Sample D Female 86.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
386018 Antisense, RP_040804_01_A05, Mouse strain C57BL/6J (56 days, male) 2.7

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