HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:107.1 nTPM
HPA:107.1 nTPM
GTEx:118.3 nTPM
FANTOM5:114.2 Scaled Tags Per Million
Pig:30.3 nTPM
Mouse:171.8 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA076020
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 107.1
Sample id Sample description nTPM
Hippocampus
nTPM: 101.2
1898 Male, age 80, left hemisphere 112.6
2529 Female, age 94, left hemisphere 102.8
2621 Female, age 67, right hemisphere 100.1
2148 Female, age 91, left hemisphere 98.7
1911 Female, age 85, right hemisphere 97.7
1855 Male, age 76, left hemisphere 95.5
Dentate gyrus
nTPM: 102.9
1927 Female, age 91, both hemispheres 105.8
2010 Male, age 76, both hemispheres 105.7
2530 Female, age 94, left hemisphere 103.9
2246 Female, age 85, both hemispheres 101.9
2528 Male, age 74, both hemispheres 101.9
2531 Female, age 67, both hemispheres 98.3
Entorhinal gyrus
nTPM: 99.4
2764 Male, age 80, right hemisphere 107.5
1938 Female, age 85, left hemisphere 101.3
1787 Male, age 76, left hemisphere 100.0
2117 Female, age 91, right hemisphere 97.3
2613 Female, age 94, left hemisphere 96.6
2686 Male, age 75, right hemisphere 93.8
Hippocampus, CA1
nTPM: 107.1
2749 Male, age 80, left hemisphere 123.4
2527 Male, age 74, both hemispheres 108.6
1873 Female, age 85, both hemispheres 106.2
2082 Female, age 91, right hemisphere 99.3
2045 Male, age 76, both hemispheres 98.2
Hippocampus, CA2
nTPM: 105.6
1892 Male, age 76, both hemispheres 113.5
2249 Male, age 74, both hemispheres 113.2
1963 Male, age 80, left hemisphere 110.9
2437 Female, age 94, left hemisphere 101.2
2113 Female, age 91, right hemisphere 97.9
1940 Female, age 85, left hemisphere 96.7
Hippocampus, CA3
nTPM: 103.8
2137 Male, age 80, left hemisphere 111.4
2436 Male, age 74, both hemispheres 111.0
1867 Male, age 76, both hemispheres 106.5
2620 Female, age 94, left hemisphere 102.7
1891 Female, age 85, both hemispheres 99.0
2861 Female, age 67, both hemispheres 92.2
Parahippocampal cortex
nTPM: 101.3
1850 Male, age 80, both hemispheres 108.2
2250 Female, age 67, right hemisphere 107.1
1990 Female, age 91, right hemisphere 105.9
2245 Female, age 91, both hemispheres 103.8
1933 Female, age 85, both hemispheres 102.7
2018 Male, age 76, both hemispheres 100.2
2532 Female, age 72, left hemisphere 100.1
2692 Male, age 74, both hemispheres 98.2
2693 Female, age 94, both hemispheres 95.0
2622 Female, age 67, right hemisphere 91.4
Perirhinal gyrus
nTPM: 107.1
1847 Female, age 91, left hemisphere 116.5
1794 Male, age 80, right hemisphere 112.4
1841 Female, age 85, right hemisphere 107.1
2521 Female, age 94, right hemisphere 100.3
2848 Male, age 76, right hemisphere 99.3
Subiculum
nTPM: 100.5
1977 Female, age 85, both hemispheres 107.4
1901 Male, age 80, both hemispheres 104.9
2619 Male, age 74, both hemispheres 98.9
2729 Female, age 91, right hemisphere 98.5
2438 Female, age 94, left hemisphere 97.2
2042 Male, age 76, both hemispheres 95.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 118.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 118.3
Samples: 197

Max nTPM: 349.2
Min nTPM: 51.6
Std nTPM: 44.0
Median nTPM: 110.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 349.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 279.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 250.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 244.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 243.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 213.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 202.5
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 194.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 192.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 185.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 185.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 114.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 114.2
FF:10169-103B7 60 years, female 166.3
FF:10153-102I9 76 years, female 62.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.3
Samples: 4

Max nTPM: 36.6
Min nTPM: 26.5
Sample A Female 36.6
Sample B Female 29.5
Sample C Male 28.7
Sample D Male 26.5
Entorhinal cortex
nTPM: 27.3
Samples: 4

Max nTPM: 30.1
Min nTPM: 24.2
Sample A Female 30.1
Sample B Female 29.4
Sample C Male 24.2
Sample D Male 25.4
Subiculum
nTPM: 26.4
Samples: 4

Max nTPM: 30.4
Min nTPM: 24.6
Sample A Female 30.4
Sample B Female 25.3
Sample C Male 25.4
Sample D Male 24.6
Ventral hippocampus
nTPM: 29.5
Samples: 4

Max nTPM: 33.2
Min nTPM: 23.8
Sample A Female 33.2
Sample B Female 23.8
Sample C Male 31.5
Sample D Male 29.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 171.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 147.6
Samples: 4

Max nTPM: 167.3
Min nTPM: 132.7
Sample A Male 140.9
Sample B Male 149.4
Sample C Female 167.3
Sample D Female 132.7
Hippocampal formation
nTPM: 171.8
Samples: 4

Max nTPM: 191.5
Min nTPM: 151.8
Sample A Male 191.5
Sample B Male 170.7
Sample C Female 151.8
Sample D Female 173.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
69174341 Antisense, RP_050329_02_B11, Mouse strain C57BL/6J (56 days, male) 1.6

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