HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.7 nTPM
HPA:14.7 nTPM
GTEx:10.7 nTPM
FANTOM5:14.5 Scaled Tags Per Million
Pig:7.2 nTPM
Mouse:4.5 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022914Antibody HPA064732
Glial cells LowHigh
Neuronal cells LowHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.7
Sample id Sample description nTPM
Hippocampus
nTPM: 14.4
1911 Female, age 85, right hemisphere 14.7
2529 Female, age 94, left hemisphere 14.7
2621 Female, age 67, right hemisphere 14.6
2148 Female, age 91, left hemisphere 14.4
1898 Male, age 80, left hemisphere 14.1
1855 Male, age 76, left hemisphere 14.0
Dentate gyrus
nTPM: 14.7
2528 Male, age 74, both hemispheres 16.0
2530 Female, age 94, left hemisphere 15.3
2531 Female, age 67, both hemispheres 15.0
2010 Male, age 76, both hemispheres 14.5
2246 Female, age 85, both hemispheres 14.2
1927 Female, age 91, both hemispheres 13.0
Entorhinal gyrus
nTPM: 14.7
2117 Female, age 91, right hemisphere 15.5
2613 Female, age 94, left hemisphere 15.2
2686 Male, age 75, right hemisphere 15.1
2764 Male, age 80, right hemisphere 14.6
1787 Male, age 76, left hemisphere 14.0
1938 Female, age 85, left hemisphere 14.0
Hippocampus, CA1
nTPM: 14.0
2045 Male, age 76, both hemispheres 15.3
2082 Female, age 91, right hemisphere 15.2
2527 Male, age 74, both hemispheres 14.4
1873 Female, age 85, both hemispheres 13.5
2749 Male, age 80, left hemisphere 11.4
Hippocampus, CA2
nTPM: 14.2
2113 Female, age 91, right hemisphere 15.0
2249 Male, age 74, both hemispheres 14.5
1940 Female, age 85, left hemisphere 14.1
2437 Female, age 94, left hemisphere 14.1
1963 Male, age 80, left hemisphere 14.0
1892 Male, age 76, both hemispheres 13.3
Hippocampus, CA3
nTPM: 14.4
2620 Female, age 94, left hemisphere 17.0
1891 Female, age 85, both hemispheres 15.4
1867 Male, age 76, both hemispheres 14.4
2861 Female, age 67, both hemispheres 14.1
2436 Male, age 74, both hemispheres 13.4
2137 Male, age 80, left hemisphere 12.0
Parahippocampal cortex
nTPM: 14.1
2018 Male, age 76, both hemispheres 15.1
2622 Female, age 67, right hemisphere 14.8
2532 Female, age 72, left hemisphere 14.7
1990 Female, age 91, right hemisphere 14.5
2692 Male, age 74, both hemispheres 14.4
2693 Female, age 94, both hemispheres 14.4
2250 Female, age 67, right hemisphere 13.9
2245 Female, age 91, both hemispheres 13.7
1850 Male, age 80, both hemispheres 13.1
1933 Female, age 85, both hemispheres 13.0
Perirhinal gyrus
nTPM: 13.3
2848 Male, age 76, right hemisphere 15.0
2521 Female, age 94, right hemisphere 13.1
1794 Male, age 80, right hemisphere 13.0
1841 Female, age 85, right hemisphere 13.0
1847 Female, age 91, left hemisphere 12.6
Subiculum
nTPM: 14.7
2619 Male, age 74, both hemispheres 15.5
2042 Male, age 76, both hemispheres 15.4
2729 Female, age 91, right hemisphere 15.3
1977 Female, age 85, both hemispheres 14.3
1901 Male, age 80, both hemispheres 14.1
2438 Female, age 94, left hemisphere 13.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.7
Samples: 197

Max nTPM: 22.4
Min nTPM: 5.0
Std nTPM: 2.5
Median nTPM: 10.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 22.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 19.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 17.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 16.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 16.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 16.4
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 15.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 15.4
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 14.6
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 14.5
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 14.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.5
FF:10153-102I9 76 years, female 20.6
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.9
Samples: 4

Max nTPM: 7.7
Min nTPM: 6.3
Sample A Female 6.4
Sample B Female 6.3
Sample C Male 7.7
Sample D Male 7.2
Entorhinal cortex
nTPM: 5.8
Samples: 4

Max nTPM: 6.3
Min nTPM: 5.4
Sample A Female 5.4
Sample B Female 5.4
Sample C Male 5.9
Sample D Male 6.3
Subiculum
nTPM: 7.0
Samples: 4

Max nTPM: 7.6
Min nTPM: 6.5
Sample A Female 6.9
Sample B Female 6.5
Sample C Male 7.0
Sample D Male 7.6
Ventral hippocampus
nTPM: 7.3
Samples: 4

Max nTPM: 9.4
Min nTPM: 5.9
Sample A Female 5.9
Sample B Female 6.1
Sample C Male 9.4
Sample D Male 7.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.2
Samples: 4

Max nTPM: 4.9
Min nTPM: 3.1
Sample A Male 4.9
Sample B Male 4.9
Sample C Female 3.9
Sample D Female 3.1
Hippocampal formation
nTPM: 4.6
Samples: 4

Max nTPM: 5.6
Min nTPM: 3.7
Sample A Male 4.0
Sample B Male 4.9
Sample C Female 3.7
Sample D Female 5.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
68798831 Antisense, RP_050217_01_D06, Mouse strain C57BL/6J (56 days, male) 3.2
112649476 Antisense, RP_090724_02_D02, Mouse strain C57BL/6J (56 days, male) 0.7

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