HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:109.0 nTPM
HPA:109.0 nTPM
GTEx:135.3 nTPM
FANTOM5:124.4 Scaled Tags Per Million
Pig:73.3 nTPM
Mouse:473.8 nTPM
Allen mouse:8.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA071684
Glial cells Low
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 109.0
Sample id Sample description nTPM
Hippocampus
nTPM: 106.0
1898 Male, age 80, left hemisphere 116.7
2529 Female, age 94, left hemisphere 105.8
2148 Female, age 91, left hemisphere 105.1
1911 Female, age 85, right hemisphere 104.2
2621 Female, age 67, right hemisphere 103.8
1855 Male, age 76, left hemisphere 100.1
Dentate gyrus
nTPM: 104.0
2528 Male, age 74, both hemispheres 111.0
1927 Female, age 91, both hemispheres 109.4
2530 Female, age 94, left hemisphere 105.0
2010 Male, age 76, both hemispheres 102.9
2246 Female, age 85, both hemispheres 100.6
2531 Female, age 67, both hemispheres 94.9
Entorhinal gyrus
nTPM: 102.4
2117 Female, age 91, right hemisphere 108.3
1938 Female, age 85, left hemisphere 105.5
2764 Male, age 80, right hemisphere 103.9
2686 Male, age 75, right hemisphere 103.2
1787 Male, age 76, left hemisphere 100.7
2613 Female, age 94, left hemisphere 93.0
Hippocampus, CA1
nTPM: 108.0
2749 Male, age 80, left hemisphere 118.5
2527 Male, age 74, both hemispheres 118.1
1873 Female, age 85, both hemispheres 103.7
2082 Female, age 91, right hemisphere 103.7
2045 Male, age 76, both hemispheres 96.2
Hippocampus, CA2
nTPM: 109.0
2249 Male, age 74, both hemispheres 119.9
1892 Male, age 76, both hemispheres 112.3
1963 Male, age 80, left hemisphere 112.1
2437 Female, age 94, left hemisphere 105.5
2113 Female, age 91, right hemisphere 102.8
1940 Female, age 85, left hemisphere 101.2
Hippocampus, CA3
nTPM: 106.2
2436 Male, age 74, both hemispheres 118.5
1867 Male, age 76, both hemispheres 110.7
1891 Female, age 85, both hemispheres 107.3
2137 Male, age 80, left hemisphere 106.7
2861 Female, age 67, both hemispheres 97.7
2620 Female, age 94, left hemisphere 96.2
Parahippocampal cortex
nTPM: 104.7
2250 Female, age 67, right hemisphere 112.9
1990 Female, age 91, right hemisphere 109.6
1933 Female, age 85, both hemispheres 107.4
1850 Male, age 80, both hemispheres 106.5
2245 Female, age 91, both hemispheres 105.2
2692 Male, age 74, both hemispheres 104.5
2693 Female, age 94, both hemispheres 101.6
2622 Female, age 67, right hemisphere 100.7
2532 Female, age 72, left hemisphere 99.5
2018 Male, age 76, both hemispheres 98.8
Perirhinal gyrus
nTPM: 105.8
1847 Female, age 91, left hemisphere 113.1
1794 Male, age 80, right hemisphere 109.7
1841 Female, age 85, right hemisphere 106.2
2521 Female, age 94, right hemisphere 103.8
2848 Male, age 76, right hemisphere 96.2
Subiculum
nTPM: 104.3
2619 Male, age 74, both hemispheres 110.7
1901 Male, age 80, both hemispheres 108.1
1977 Female, age 85, both hemispheres 106.5
2729 Female, age 91, right hemisphere 105.9
2042 Male, age 76, both hemispheres 99.4
2438 Female, age 94, left hemisphere 95.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 135.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 135.3
Samples: 197

Max nTPM: 224.4
Min nTPM: 81.0
Std nTPM: 27.6
Median nTPM: 130.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 224.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 216.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 200.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 200.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 194.0
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 192.5
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 191.8
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 188.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 186.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 183.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 181.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 124.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 124.4
FF:10169-103B7 60 years, female 155.9
FF:10153-102I9 76 years, female 93.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 73.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 73.3
Samples: 4

Max nTPM: 94.0
Min nTPM: 55.9
Sample A Female 94.0
Sample B Female 72.3
Sample C Male 70.8
Sample D Male 55.9
Entorhinal cortex
nTPM: 59.2
Samples: 4

Max nTPM: 84.1
Min nTPM: 46.4
Sample A Female 53.9
Sample B Female 84.1
Sample C Male 52.5
Sample D Male 46.4
Subiculum
nTPM: 52.8
Samples: 4

Max nTPM: 72.0
Min nTPM: 43.0
Sample A Female 72.0
Sample B Female 53.0
Sample C Male 43.0
Sample D Male 43.3
Ventral hippocampus
nTPM: 66.6
Samples: 4

Max nTPM: 75.3
Min nTPM: 48.5
Sample A Female 75.3
Sample B Female 48.5
Sample C Male 75.1
Sample D Male 67.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 473.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 386.1
Samples: 4

Max nTPM: 406.2
Min nTPM: 376.3
Sample A Male 376.3
Sample B Male 380.9
Sample C Female 406.2
Sample D Female 380.8
Hippocampal formation
nTPM: 473.8
Samples: 4

Max nTPM: 488.4
Min nTPM: 440.6
Sample A Male 484.2
Sample B Male 440.6
Sample C Female 488.4
Sample D Female 481.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.8
2591 Antisense, RP_040507_01_D05, Mouse strain C57BL/6J (56 days, male) 8.8
2592 Antisense, RP_040507_01_D05, Mouse strain C57BL/6J (56 days, male) 7.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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