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SLC25A5
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  • SLC25A5
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:173.5 nTPM
FANTOM5:104.6 Scaled Tags Per Million
Pig:77.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA071684
Glial cells Low
Neuronal cells Low

CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 173.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 173.5
Samples: 246

Max nTPM: 489.9
Min nTPM: 86.9
Std nTPM: 44.2
Median nTPM: 170.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 489.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 334.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 299.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 296.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 273.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 272.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 261.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 261.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 258.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 252.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 245.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 244.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 243.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 243.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 242.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 242.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 241.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 236.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 236.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 232.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 231.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 229.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 222.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 222.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 220.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 218.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 218.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 216.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 216.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 215.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 215.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 215.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 214.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 213.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 211.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 210.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 210.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 208.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 208.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 208.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 207.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 207.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 206.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 205.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 205.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 205.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 204.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 202.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 202.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 202.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 202.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 201.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 200.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 200.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 199.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 199.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 197.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 197.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 196.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 196.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 196.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 195.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 195.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 195.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 194.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 194.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 194.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 193.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 193.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 193.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 192.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 192.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 191.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 191.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 190.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 189.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 187.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 186.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 186.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 186.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 186.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 185.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 185.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 183.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 183.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 182.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 182.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 182.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 181.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 181.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 181.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 181.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 180.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 180.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 180.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 180.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 179.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 179.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 178.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 178.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 178.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 178.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 178.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 177.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 176.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 175.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 175.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 174.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 174.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 173.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 173.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 172.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 172.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 172.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 172.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 172.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 172.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 172.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 171.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 170.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 170.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 170.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 170.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 170.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 169.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 168.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 168.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 167.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 167.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 166.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 166.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 165.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 165.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 165.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 165.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 164.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 163.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 163.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 163.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 163.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 162.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 162.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 162.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 161.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 160.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 160.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 160.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 159.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 159.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 157.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 157.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 156.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 156.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 155.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 155.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 155.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 154.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 154.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 154.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 153.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 153.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 152.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 152.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 152.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 152.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 151.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 150.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 149.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 149.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 149.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 148.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 147.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 147.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 147.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 147.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 146.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 146.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 146.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 146.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 146.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 145.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 145.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 145.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 145.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 145.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 145.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 144.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 144.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 144.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 144.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 143.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 142.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 142.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 141.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 141.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 141.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 140.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 140.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 139.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 139.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 139.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 139.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 138.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 137.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 136.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 136.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 136.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 135.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 135.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 135.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 134.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 132.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 132.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 131.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 130.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 130.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 129.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 128.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 127.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 125.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 125.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 125.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 124.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 123.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 122.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 122.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 120.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 119.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 118.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 118.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 117.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 117.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 116.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 113.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 113.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 111.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 111.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 109.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 109.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 109.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 101.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 101.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 98.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 98.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 96.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 86.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 104.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 104.6
FF:10164-103B2 76 years, female 104.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 77.1
Pig sample Sample description nTPM
Caudate
nTPM: 77.1
Samples: 4

Max nTPM: 95.6
Min nTPM: 58.3
Sample A Female 58.3
Sample B Female 81.1
Sample C Male 95.6
Sample D Male 73.4

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