We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RHBDD2
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • RHBDD2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:256.5 nTPM
FANTOM5:313.9 Scaled Tags Per Million
Pig:124.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA051960
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 256.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 256.5
Samples: 246

Max nTPM: 457.3
Min nTPM: 102.7
Std nTPM: 71.2
Median nTPM: 256.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 457.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 455.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 453.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 440.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 436.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 402.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 401.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 400.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 397.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 396.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 391.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 390.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 388.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 388.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 388.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 387.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 370.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 369.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 369.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 368.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 367.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 356.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 356.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 355.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 351.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 347.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 347.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 344.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 344.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 339.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 335.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 334.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 333.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 332.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 331.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 329.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 329.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 328.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 326.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 325.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 321.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 321.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 321.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 321.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 319.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 319.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 319.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 318.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 317.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 317.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 314.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 314.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 309.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 308.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 308.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 304.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 302.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 302.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 301.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 301.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 301.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 300.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 297.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 296.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 296.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 296.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 295.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 291.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 291.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 290.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 289.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 289.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 289.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 289.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 289.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 288.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 288.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 288.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 288.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 287.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 286.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 286.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 286.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 285.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 283.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 283.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 277.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 275.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 275.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 275.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 274.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 274.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 274.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 274.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 273.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 272.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 272.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 272.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 271.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 271.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 271.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 269.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 268.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 267.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 267.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 266.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 265.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 265.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 265.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 264.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 264.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 263.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 263.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 263.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 263.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 261.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 260.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 260.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 259.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 259.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 258.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 256.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 256.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 255.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 255.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 253.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 253.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 253.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 251.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 251.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 250.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 249.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 249.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 249.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 248.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 248.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 247.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 244.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 241.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 240.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 240.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 239.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 237.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 237.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 236.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 235.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 234.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 233.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 232.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 232.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 229.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 228.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 226.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 226.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 223.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 223.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 223.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 222.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 221.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 221.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 220.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 220.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 219.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 218.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 218.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 218.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 217.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 217.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 216.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 216.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 216.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 215.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 214.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 211.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 211.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 211.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 208.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 206.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 205.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 204.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 203.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 203.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 202.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 202.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 202.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 202.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 200.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 200.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 199.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 197.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 196.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 196.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 194.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 193.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 192.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 191.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 191.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 191.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 190.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 188.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 188.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 188.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 187.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 187.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 183.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 183.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 182.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 182.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 180.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 180.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 180.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 180.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 180.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 179.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 177.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 171.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 168.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 167.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 167.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 166.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 166.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 166.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 166.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 162.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 162.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 162.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 161.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 161.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 161.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 161.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 160.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 160.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 156.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 155.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 151.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 150.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 144.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 143.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 140.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 137.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 131.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 124.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 119.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 115.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 115.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 102.7
Show allShow less

CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 313.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 313.9
FF:10164-103B2 76 years, female 313.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 124.8
Pig sample Sample description nTPM
Caudate
nTPM: 124.8
Samples: 4

Max nTPM: 147.3
Min nTPM: 106.3
Sample A Female 106.3
Sample B Female 133.4
Sample C Male 147.3
Sample D Male 112.1

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.