COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:29.4 nTPM
HPA:11.7 nTPM
GTEx:29.4 nTPM
FANTOM5:46.2 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 11.7
overview
Male, age 54 		Colon sample 67
nTPM: 10.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 10.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 8.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 12
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 14.9
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 10.9
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 12.9
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 11
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 13.6
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 10.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 12.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 15.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 29.4
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 29.4
Samples: 373

Max nTPM: 43.1
Min nTPM: 15.8
Std nTPM: 4.3
Median nTPM: 29.6
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 43.1
GTEX-17F9Y-2626-SM-7IGN9 70-79 years, female 42.7
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 42.6
GTEX-16MTA-1626-SM-6M47N 50-59 years, male 41.4
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 41.0
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 40.4
GTEX-15RIE-2026-SM-7KFRW 60-69 years, male 39.9
GTEX-183WM-2526-SM-731BP 70-79 years, female 39.3
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 38.7
GTEX-1AX9J-2526-SM-73KUY 60-69 years, male 38.0
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 37.6
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Colon - Transverse
Average nTPM: 23.7
Samples: 406

Max nTPM: 74.5
Min nTPM: 9.5
Std nTPM: 7.6
Median nTPM: 22.5
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 74.5
GTEX-1PWST-2426-SM-EWRMP 70-79 years, male 49.9
GTEX-1OKEX-1226-SM-DTXEC 60-69 years, male 48.7
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 46.7
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 45.3
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 44.0
GTEX-1F75B-2726-SM-7P8QO 50-59 years, male 41.4
GTEX-16NPV-2626-SM-6M484 50-59 years, female 40.8
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 40.5
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 39.8
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 39.7
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 46.2
FF:10014-101C5 62,83,84 years, mixed 46.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.