HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:51.2 nTPM
HPA:51.2 nTPM
GTEx:52.6 nTPM
FANTOM5:35.2 Scaled Tags Per Million
Pig:14.7 nTPM
Mouse:19.9 nTPM
Allen mouse:12.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040473
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.2
Sample id Sample description nTPM
Hippocampus
nTPM: 41.8
2529 Female, age 94, left hemisphere 46.8
1911 Female, age 85, right hemisphere 46.7
2621 Female, age 67, right hemisphere 42.0
2148 Female, age 91, left hemisphere 38.8
1855 Male, age 76, left hemisphere 38.2
1898 Male, age 80, left hemisphere 38.1
Dentate gyrus
nTPM: 41.7
2530 Female, age 94, left hemisphere 48.8
2528 Male, age 74, both hemispheres 43.7
2010 Male, age 76, both hemispheres 40.9
2246 Female, age 85, both hemispheres 40.7
2531 Female, age 67, both hemispheres 39.5
1927 Female, age 91, both hemispheres 36.4
Entorhinal gyrus
nTPM: 43.7
2117 Female, age 91, right hemisphere 57.8
2764 Male, age 80, right hemisphere 47.6
2613 Female, age 94, left hemisphere 42.2
2686 Male, age 75, right hemisphere 40.7
1938 Female, age 85, left hemisphere 38.7
1787 Male, age 76, left hemisphere 35.0
Hippocampus, CA1
nTPM: 37.9
2527 Male, age 74, both hemispheres 44.0
2082 Female, age 91, right hemisphere 42.9
1873 Female, age 85, both hemispheres 39.6
2749 Male, age 80, left hemisphere 34.7
2045 Male, age 76, both hemispheres 28.4
Hippocampus, CA2
nTPM: 44.7
2249 Male, age 74, both hemispheres 55.9
1963 Male, age 80, left hemisphere 47.5
1940 Female, age 85, left hemisphere 45.1
2437 Female, age 94, left hemisphere 44.4
2113 Female, age 91, right hemisphere 43.3
1892 Male, age 76, both hemispheres 32.0
Hippocampus, CA3
nTPM: 43.9
2436 Male, age 74, both hemispheres 74.7
1891 Female, age 85, both hemispheres 52.2
2620 Female, age 94, left hemisphere 36.4
1867 Male, age 76, both hemispheres 34.2
2861 Female, age 67, both hemispheres 33.1
2137 Male, age 80, left hemisphere 32.4
Parahippocampal cortex
nTPM: 39.0
2692 Male, age 74, both hemispheres 48.4
1990 Female, age 91, right hemisphere 44.1
2532 Female, age 72, left hemisphere 44.0
1850 Male, age 80, both hemispheres 39.0
1933 Female, age 85, both hemispheres 38.3
2245 Female, age 91, both hemispheres 38.2
2693 Female, age 94, both hemispheres 38.2
2018 Male, age 76, both hemispheres 36.6
2250 Female, age 67, right hemisphere 34.3
2622 Female, age 67, right hemisphere 29.2
Perirhinal gyrus
nTPM: 33.9
2521 Female, age 94, right hemisphere 37.3
1794 Male, age 80, right hemisphere 33.6
1847 Female, age 91, left hemisphere 33.4
2848 Male, age 76, right hemisphere 33.0
1841 Female, age 85, right hemisphere 32.4
Subiculum
nTPM: 51.2
2042 Male, age 76, both hemispheres 62.6
1901 Male, age 80, both hemispheres 56.1
2438 Female, age 94, left hemisphere 51.4
1977 Female, age 85, both hemispheres 50.0
2619 Male, age 74, both hemispheres 43.7
2729 Female, age 91, right hemisphere 43.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 52.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.6
Samples: 197

Max nTPM: 178.1
Min nTPM: 8.1
Std nTPM: 28.2
Median nTPM: 45.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 178.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 139.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 134.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 123.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 116.6
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 110.2
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 109.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 107.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 106.9
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 103.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 102.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.2
FF:10169-103B7 60 years, female 39.7
FF:10153-102I9 76 years, female 30.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.7
Samples: 4

Max nTPM: 21.8
Min nTPM: 8.2
Sample A Female 21.8
Sample B Female 11.0
Sample C Male 17.9
Sample D Male 8.2
Entorhinal cortex
nTPM: 6.6
Samples: 4

Max nTPM: 8.1
Min nTPM: 5.5
Sample A Female 5.5
Sample B Female 8.1
Sample C Male 5.6
Sample D Male 7.3
Subiculum
nTPM: 7.7
Samples: 4

Max nTPM: 9.2
Min nTPM: 7.1
Sample A Female 7.1
Sample B Female 9.2
Sample C Male 7.3
Sample D Male 7.1
Ventral hippocampus
nTPM: 11.0
Samples: 4

Max nTPM: 13.5
Min nTPM: 8.3
Sample A Female 12.8
Sample B Female 8.3
Sample C Male 9.5
Sample D Male 13.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.5
Samples: 4

Max nTPM: 13.0
Min nTPM: 8.3
Sample A Male 13.0
Sample B Male 9.1
Sample C Female 11.4
Sample D Female 8.3
Hippocampal formation
nTPM: 19.9
Samples: 4

Max nTPM: 25.5
Min nTPM: 13.9
Sample A Male 13.9
Sample B Male 16.9
Sample C Female 23.4
Sample D Female 25.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.7
576427 Antisense, RP_040826_01_H01, Mouse strain C57BL/6J (56 days, male) 12.7

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