HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:92.1 nTPM
HPA:92.1 nTPM
GTEx:74.3 nTPM
FANTOM5:182.6 Scaled Tags Per Million
Pig:94.5 nTPM
Mouse:177.9 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA067983Antibody CAB017631
Glial cells Not detectedLow
Neuronal cells HighNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 92.1
Sample id Sample description nTPM
Hippocampus
nTPM: 76.2
1898 Male, age 80, left hemisphere 96.6
1855 Male, age 76, left hemisphere 87.9
2621 Female, age 67, right hemisphere 70.8
2148 Female, age 91, left hemisphere 69.2
1911 Female, age 85, right hemisphere 68.5
2529 Female, age 94, left hemisphere 63.9
Dentate gyrus
nTPM: 75.2
2010 Male, age 76, both hemispheres 90.8
1927 Female, age 91, both hemispheres 90.4
2246 Female, age 85, both hemispheres 73.8
2530 Female, age 94, left hemisphere 69.1
2528 Male, age 74, both hemispheres 67.8
2531 Female, age 67, both hemispheres 59.4
Entorhinal gyrus
nTPM: 76.2
1938 Female, age 85, left hemisphere 89.2
2764 Male, age 80, right hemisphere 84.5
1787 Male, age 76, left hemisphere 80.3
2613 Female, age 94, left hemisphere 77.7
2117 Female, age 91, right hemisphere 64.7
2686 Male, age 75, right hemisphere 60.6
Hippocampus, CA1
nTPM: 91.6
2749 Male, age 80, left hemisphere 134.4
2045 Male, age 76, both hemispheres 94.7
1873 Female, age 85, both hemispheres 90.7
2527 Male, age 74, both hemispheres 75.9
2082 Female, age 91, right hemisphere 62.4
Hippocampus, CA2
nTPM: 78.8
1892 Male, age 76, both hemispheres 102.2
1963 Male, age 80, left hemisphere 99.9
1940 Female, age 85, left hemisphere 73.4
2249 Male, age 74, both hemispheres 67.6
2113 Female, age 91, right hemisphere 65.4
2437 Female, age 94, left hemisphere 64.7
Hippocampus, CA3
nTPM: 85.1
2137 Male, age 80, left hemisphere 126.4
1867 Male, age 76, both hemispheres 93.9
1891 Female, age 85, both hemispheres 74.7
2436 Male, age 74, both hemispheres 74.4
2620 Female, age 94, left hemisphere 72.2
2861 Female, age 67, both hemispheres 69.0
Parahippocampal cortex
nTPM: 77.3
1850 Male, age 80, both hemispheres 93.2
1933 Female, age 85, both hemispheres 85.8
2245 Female, age 91, both hemispheres 79.5
2018 Male, age 76, both hemispheres 79.0
2250 Female, age 67, right hemisphere 77.2
1990 Female, age 91, right hemisphere 75.5
2693 Female, age 94, both hemispheres 73.0
2532 Female, age 72, left hemisphere 72.9
2692 Male, age 74, both hemispheres 69.5
2622 Female, age 67, right hemisphere 67.2
Perirhinal gyrus
nTPM: 92.1
1847 Female, age 91, left hemisphere 108.4
1794 Male, age 80, right hemisphere 91.5
1841 Female, age 85, right hemisphere 91.2
2521 Female, age 94, right hemisphere 87.4
2848 Male, age 76, right hemisphere 82.2
Subiculum
nTPM: 75.3
1901 Male, age 80, both hemispheres 92.2
1977 Female, age 85, both hemispheres 85.8
2042 Male, age 76, both hemispheres 75.7
2619 Male, age 74, both hemispheres 72.2
2729 Female, age 91, right hemisphere 68.3
2438 Female, age 94, left hemisphere 57.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 74.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 74.3
Samples: 197

Max nTPM: 133.4
Min nTPM: 45.3
Std nTPM: 17.2
Median nTPM: 69.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 133.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 130.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 127.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 122.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 114.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 114.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 113.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 111.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 110.4
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 105.7
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 105.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 182.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 182.6
FF:10169-103B7 60 years, female 197.7
FF:10153-102I9 76 years, female 167.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 94.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 94.5
Samples: 4

Max nTPM: 120.3
Min nTPM: 70.2
Sample A Female 120.3
Sample B Female 100.2
Sample C Male 87.2
Sample D Male 70.2
Entorhinal cortex
nTPM: 88.8
Samples: 4

Max nTPM: 98.0
Min nTPM: 75.9
Sample A Female 98.0
Sample B Female 93.4
Sample C Male 87.7
Sample D Male 75.9
Subiculum
nTPM: 90.7
Samples: 4

Max nTPM: 118.2
Min nTPM: 75.9
Sample A Female 118.2
Sample B Female 85.5
Sample C Male 83.1
Sample D Male 75.9
Ventral hippocampus
nTPM: 90.4
Samples: 4

Max nTPM: 104.6
Min nTPM: 64.2
Sample A Female 95.9
Sample B Female 64.2
Sample C Male 104.6
Sample D Male 96.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 177.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 158.2
Samples: 4

Max nTPM: 195.7
Min nTPM: 137.5
Sample A Male 143.3
Sample B Male 137.5
Sample C Female 156.1
Sample D Female 195.7
Hippocampal formation
nTPM: 177.9
Samples: 4

Max nTPM: 206.4
Min nTPM: 154.1
Sample A Male 161.9
Sample B Male 189.1
Sample C Female 206.4
Sample D Female 154.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
112648612 Antisense, RP_110407_02_D01, Mouse strain C57BL/6J (56 days, male) 7.1
97 Antisense, RP_Baylor_103280, Mouse strain C57BL/6J (56 days, male) 0.9
96 Antisense, RP_Baylor_103280, Mouse strain C57BL/6J (56 days, male) 0.5
99 Sense, RPS_Baylor_37100, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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