We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
TAC1
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • TAC1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:236.5 nTPM
FANTOM5:78.9 Scaled Tags Per Million
Pig:264.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA014429
Glial cells Not detected
Neuronal cells Low



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 236.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 236.5
Samples: 246

Max nTPM: 1271.2
Min nTPM: 0.8
Std nTPM: 177.2
Median nTPM: 216.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1271.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 755.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 718.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 675.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 673.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 655.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 637.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 627.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 609.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 607.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 598.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 596.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 556.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 527.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 518.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 515.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 509.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 502.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 492.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 486.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 482.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 479.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 479.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 463.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 449.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 449.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 449.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 443.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 442.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 435.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 430.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 424.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 421.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 416.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 405.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 404.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 398.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 397.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 395.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 392.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 390.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 387.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 387.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 384.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 384.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 378.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 376.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 376.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 375.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 375.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 371.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 370.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 367.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 366.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 366.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 365.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 364.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 360.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 358.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 358.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 354.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 352.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 346.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 346.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 342.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 339.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 334.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 333.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 326.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 325.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 322.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 322.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 319.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 315.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 308.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 306.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 306.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 306.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 300.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 300.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 296.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 295.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 293.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 290.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 287.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 283.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 278.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 272.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 268.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 267.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 267.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 263.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 262.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 261.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 260.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 255.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 252.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 252.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 251.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 249.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 248.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 248.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 246.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 245.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 243.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 241.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 241.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 237.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 237.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 237.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 236.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 236.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 232.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 232.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 231.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 231.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 231.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 229.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 226.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 226.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 224.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 220.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 217.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 216.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 207.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 198.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 197.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 197.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 195.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 194.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 193.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 192.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 190.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 186.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 186.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 186.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 182.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 181.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 178.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 177.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 175.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 174.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 174.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 172.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 167.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 166.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 166.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 166.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 165.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 163.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 158.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 156.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 156.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 156.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 153.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 147.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 145.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 144.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 140.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 133.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 133.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 131.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 131.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 127.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 125.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 121.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 121.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 120.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 119.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 118.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 117.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 116.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 116.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 116.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 116.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 112.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 111.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 110.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 110.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 110.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 109.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 106.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 104.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 97.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 95.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 94.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 92.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 91.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 91.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 88.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 88.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 88.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 86.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 82.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 79.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 75.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 75.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 74.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 71.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 67.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 67.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 66.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 65.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 63.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 63.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 63.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 63.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 56.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 56.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 56.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 53.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 50.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 47.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 45.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 43.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 42.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 41.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 40.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 40.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 39.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 36.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 36.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 34.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 32.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 31.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 31.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 30.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 26.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 24.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 23.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 23.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 20.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 20.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 20.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 19.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 17.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 14.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 13.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 12.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 11.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 11.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 9.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 5.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 4.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 4.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 0.8
Show allShow less

CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 78.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 78.9
FF:10164-103B2 76 years, female 78.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 264.4
Pig sample Sample description nTPM
Caudate
nTPM: 264.5
Samples: 4

Max nTPM: 324.8
Min nTPM: 206.5
Sample A Female 206.5
Sample B Female 233.7
Sample C Male 324.8
Sample D Male 292.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.