HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:46.9 nTPM
HPA:46.9 nTPM
GTEx:41.8 nTPM
FANTOM5:59.8 Scaled Tags Per Million
Mouse:369.3 nTPM
Allen mouse:18.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040361Antibody CAB026192
Glial cells MediumLow
Neuronal cells HighLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.9
Sample id Sample description nTPM
Hippocampus
nTPM: 33.0
2148 Female, age 91, left hemisphere 40.2
1898 Male, age 80, left hemisphere 39.3
2621 Female, age 67, right hemisphere 35.4
1911 Female, age 85, right hemisphere 31.6
1855 Male, age 76, left hemisphere 28.5
2529 Female, age 94, left hemisphere 22.9
Dentate gyrus
nTPM: 36.5
1927 Female, age 91, both hemispheres 48.3
2531 Female, age 67, both hemispheres 43.2
2528 Male, age 74, both hemispheres 36.9
2530 Female, age 94, left hemisphere 33.7
2246 Female, age 85, both hemispheres 31.4
2010 Male, age 76, both hemispheres 25.5
Entorhinal gyrus
nTPM: 41.7
2613 Female, age 94, left hemisphere 70.9
2764 Male, age 80, right hemisphere 42.2
1938 Female, age 85, left hemisphere 40.8
2686 Male, age 75, right hemisphere 38.8
1787 Male, age 76, left hemisphere 33.4
2117 Female, age 91, right hemisphere 23.8
Hippocampus, CA1
nTPM: 39.3
2749 Male, age 80, left hemisphere 66.4
2527 Male, age 74, both hemispheres 37.0
2045 Male, age 76, both hemispheres 32.0
1873 Female, age 85, both hemispheres 31.1
2082 Female, age 91, right hemisphere 29.9
Hippocampus, CA2
nTPM: 31.1
1892 Male, age 76, both hemispheres 35.5
1963 Male, age 80, left hemisphere 33.0
2437 Female, age 94, left hemisphere 30.7
2249 Male, age 74, both hemispheres 29.9
2113 Female, age 91, right hemisphere 28.9
1940 Female, age 85, left hemisphere 28.5
Hippocampus, CA3
nTPM: 46.9
2620 Female, age 94, left hemisphere 69.3
2137 Male, age 80, left hemisphere 67.0
2861 Female, age 67, both hemispheres 50.7
1867 Male, age 76, both hemispheres 36.9
2436 Male, age 74, both hemispheres 32.6
1891 Female, age 85, both hemispheres 25.2
Parahippocampal cortex
nTPM: 36.4
2622 Female, age 67, right hemisphere 41.3
1850 Male, age 80, both hemispheres 40.6
2245 Female, age 91, both hemispheres 40.1
1990 Female, age 91, right hemisphere 39.1
2693 Female, age 94, both hemispheres 38.6
2692 Male, age 74, both hemispheres 37.7
1933 Female, age 85, both hemispheres 34.5
2250 Female, age 67, right hemisphere 32.2
2532 Female, age 72, left hemisphere 31.5
2018 Male, age 76, both hemispheres 28.6
Perirhinal gyrus
nTPM: 39.2
1847 Female, age 91, left hemisphere 50.5
1794 Male, age 80, right hemisphere 43.1
2521 Female, age 94, right hemisphere 38.9
1841 Female, age 85, right hemisphere 34.2
2848 Male, age 76, right hemisphere 29.4
Subiculum
nTPM: 31.9
1901 Male, age 80, both hemispheres 40.8
2619 Male, age 74, both hemispheres 32.9
1977 Female, age 85, both hemispheres 32.3
2042 Male, age 76, both hemispheres 31.1
2729 Female, age 91, right hemisphere 27.6
2438 Female, age 94, left hemisphere 26.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.8
Samples: 197

Max nTPM: 107.6
Min nTPM: 7.3
Std nTPM: 21.9
Median nTPM: 38.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 107.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 101.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 99.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 92.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 89.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 86.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 83.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 83.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 82.5
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 81.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 81.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.8
FF:10169-103B7 60 years, female 76.3
FF:10153-102I9 76 years, female 43.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 369.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 369.3
Samples: 4

Max nTPM: 430.0
Min nTPM: 310.7
Sample A Male 355.6
Sample B Male 381.0
Sample C Female 310.7
Sample D Female 430.0
Hippocampal formation
nTPM: 322.7
Samples: 4

Max nTPM: 369.9
Min nTPM: 271.0
Sample A Male 271.0
Sample B Male 334.3
Sample C Female 369.9
Sample D Female 315.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.5
2135 Antisense, RP_040407_02_G05, Mouse strain C57BL/6J (56 days, male) 18.5
2136 Antisense, RP_040407_02_G05, Mouse strain C57BL/6J (56 days, male) 14.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.