HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:61.9 nTPM
HPA:61.9 nTPM
GTEx:122.0 nTPM
FANTOM5:42.8 Scaled Tags Per Million
Pig:12.0 nTPM
Mouse:47.6 nTPM
Allen mouse:7.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041708Antibody HPA046765
Glial cells Not detectedMedium
Neuronal cells MediumHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 61.9
Sample id Sample description nTPM
Hippocampus
nTPM: 60.9
2621 Female, age 67, right hemisphere 64.6
2529 Female, age 94, left hemisphere 62.7
1898 Male, age 80, left hemisphere 62.3
1855 Male, age 76, left hemisphere 60.5
1911 Female, age 85, right hemisphere 57.9
2148 Female, age 91, left hemisphere 57.5
Dentate gyrus
nTPM: 58.9
2530 Female, age 94, left hemisphere 67.3
2010 Male, age 76, both hemispheres 60.9
2246 Female, age 85, both hemispheres 58.0
1927 Female, age 91, both hemispheres 57.7
2531 Female, age 67, both hemispheres 56.2
2528 Male, age 74, both hemispheres 53.0
Entorhinal gyrus
nTPM: 61.9
2686 Male, age 75, right hemisphere 63.8
1938 Female, age 85, left hemisphere 63.7
2764 Male, age 80, right hemisphere 62.8
1787 Male, age 76, left hemisphere 62.1
2613 Female, age 94, left hemisphere 61.1
2117 Female, age 91, right hemisphere 58.1
Hippocampus, CA1
nTPM: 60.2
2749 Male, age 80, left hemisphere 69.8
2527 Male, age 74, both hemispheres 60.3
1873 Female, age 85, both hemispheres 59.5
2045 Male, age 76, both hemispheres 56.7
2082 Female, age 91, right hemisphere 54.9
Hippocampus, CA2
nTPM: 59.4
1892 Male, age 76, both hemispheres 64.7
2437 Female, age 94, left hemisphere 60.6
1963 Male, age 80, left hemisphere 60.4
1940 Female, age 85, left hemisphere 58.5
2249 Male, age 74, both hemispheres 56.9
2113 Female, age 91, right hemisphere 55.2
Hippocampus, CA3
nTPM: 59.4
2861 Female, age 67, both hemispheres 64.5
2137 Male, age 80, left hemisphere 61.8
1867 Male, age 76, both hemispheres 60.9
2620 Female, age 94, left hemisphere 58.6
2436 Male, age 74, both hemispheres 55.4
1891 Female, age 85, both hemispheres 54.9
Parahippocampal cortex
nTPM: 60.7
2245 Female, age 91, both hemispheres 67.5
2532 Female, age 72, left hemisphere 64.8
2622 Female, age 67, right hemisphere 64.7
2692 Male, age 74, both hemispheres 61.7
1850 Male, age 80, both hemispheres 61.2
1933 Female, age 85, both hemispheres 59.8
2250 Female, age 67, right hemisphere 59.1
1990 Female, age 91, right hemisphere 57.4
2018 Male, age 76, both hemispheres 56.9
2693 Female, age 94, both hemispheres 53.4
Perirhinal gyrus
nTPM: 61.0
1794 Male, age 80, right hemisphere 64.4
1841 Female, age 85, right hemisphere 62.7
2848 Male, age 76, right hemisphere 60.0
1847 Female, age 91, left hemisphere 59.8
2521 Female, age 94, right hemisphere 58.1
Subiculum
nTPM: 59.8
1901 Male, age 80, both hemispheres 62.2
2042 Male, age 76, both hemispheres 62.2
2438 Female, age 94, left hemisphere 62.2
2619 Male, age 74, both hemispheres 61.7
1977 Female, age 85, both hemispheres 60.0
2729 Female, age 91, right hemisphere 50.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 122.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 122.0
Samples: 197

Max nTPM: 250.7
Min nTPM: 41.8
Std nTPM: 34.4
Median nTPM: 117.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 250.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 245.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 223.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 221.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 214.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 213.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 202.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 200.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 196.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 195.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 189.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.8
FF:10169-103B7 60 years, female 51.2
FF:10153-102I9 76 years, female 34.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.6
Samples: 4

Max nTPM: 14.7
Min nTPM: 7.9
Sample A Female 14.7
Sample B Female 10.5
Sample C Male 13.4
Sample D Male 7.9
Entorhinal cortex
nTPM: 12.0
Samples: 4

Max nTPM: 14.0
Min nTPM: 10.2
Sample A Female 10.2
Sample B Female 14.0
Sample C Male 12.3
Sample D Male 11.3
Subiculum
nTPM: 11.1
Samples: 4

Max nTPM: 16.7
Min nTPM: 8.3
Sample A Female 16.7
Sample B Female 9.2
Sample C Male 10.1
Sample D Male 8.3
Ventral hippocampus
nTPM: 11.2
Samples: 4

Max nTPM: 13.5
Min nTPM: 8.2
Sample A Female 11.9
Sample B Female 8.2
Sample C Male 13.5
Sample D Male 11.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 47.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.6
Samples: 4

Max nTPM: 57.7
Min nTPM: 39.8
Sample A Male 49.3
Sample B Male 57.7
Sample C Female 43.6
Sample D Female 39.8
Hippocampal formation
nTPM: 45.3
Samples: 4

Max nTPM: 53.2
Min nTPM: 39.2
Sample A Male 42.9
Sample B Male 45.9
Sample C Female 39.2
Sample D Female 53.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.0
69174040 Antisense, RP_050329_01_H12, Mouse strain C57BL/6J (56 days, male) 7.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.