HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:14.3 nTPM
HPA:14.3 nTPM
GTEx:12.2 nTPM
FANTOM5:6.2 Scaled Tags Per Million
Pig:5.6 nTPM
Mouse:4.6 nTPM
Allen mouse:4.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.3
Sample id Sample description nTPM
Hippocampus
nTPM: 13.6
2529 Female, age 94, left hemisphere 15.6
1855 Male, age 76, left hemisphere 13.7
1911 Female, age 85, right hemisphere 13.4
2621 Female, age 67, right hemisphere 13.2
2148 Female, age 91, left hemisphere 12.8
1898 Male, age 80, left hemisphere 12.6
Dentate gyrus
nTPM: 13.4
2530 Female, age 94, left hemisphere 14.5
2246 Female, age 85, both hemispheres 13.7
2528 Male, age 74, both hemispheres 13.7
2010 Male, age 76, both hemispheres 13.6
2531 Female, age 67, both hemispheres 12.7
1927 Female, age 91, both hemispheres 12.4
Entorhinal gyrus
nTPM: 14.3
2613 Female, age 94, left hemisphere 16.0
2686 Male, age 75, right hemisphere 14.6
1787 Male, age 76, left hemisphere 14.3
1938 Female, age 85, left hemisphere 13.9
2117 Female, age 91, right hemisphere 13.4
2764 Male, age 80, right hemisphere 13.4
Hippocampus, CA1
nTPM: 13.4
2527 Male, age 74, both hemispheres 15.2
2082 Female, age 91, right hemisphere 14.1
2045 Male, age 76, both hemispheres 13.0
1873 Female, age 85, both hemispheres 12.3
2749 Male, age 80, left hemisphere 12.3
Hippocampus, CA2
nTPM: 13.4
2249 Male, age 74, both hemispheres 14.3
2113 Female, age 91, right hemisphere 14.2
2437 Female, age 94, left hemisphere 14.1
1940 Female, age 85, left hemisphere 13.3
1963 Male, age 80, left hemisphere 12.8
1892 Male, age 76, both hemispheres 11.8
Hippocampus, CA3
nTPM: 13.4
2861 Female, age 67, both hemispheres 14.1
2436 Male, age 74, both hemispheres 13.9
2620 Female, age 94, left hemisphere 13.5
1891 Female, age 85, both hemispheres 13.3
1867 Male, age 76, both hemispheres 12.9
2137 Male, age 80, left hemisphere 12.7
Parahippocampal cortex
nTPM: 14.0
2692 Male, age 74, both hemispheres 15.6
2622 Female, age 67, right hemisphere 15.2
2018 Male, age 76, both hemispheres 14.8
2532 Female, age 72, left hemisphere 14.1
2245 Female, age 91, both hemispheres 14.0
2250 Female, age 67, right hemisphere 14.0
1990 Female, age 91, right hemisphere 13.9
1850 Male, age 80, both hemispheres 13.3
1933 Female, age 85, both hemispheres 13.3
2693 Female, age 94, both hemispheres 12.4
Perirhinal gyrus
nTPM: 12.7
1847 Female, age 91, left hemisphere 13.5
1794 Male, age 80, right hemisphere 12.8
2848 Male, age 76, right hemisphere 12.7
2521 Female, age 94, right hemisphere 12.4
1841 Female, age 85, right hemisphere 12.2
Subiculum
nTPM: 14.2
2438 Female, age 94, left hemisphere 15.4
2619 Male, age 74, both hemispheres 15.1
2042 Male, age 76, both hemispheres 13.9
1977 Female, age 85, both hemispheres 13.8
2729 Female, age 91, right hemisphere 13.5
1901 Male, age 80, both hemispheres 13.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.2
Samples: 197

Max nTPM: 34.6
Min nTPM: 2.3
Std nTPM: 5.8
Median nTPM: 11.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 34.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 31.7
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 30.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 30.8
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 29.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 26.6
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 25.3
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 25.0
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 24.7
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 24.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 24.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 6.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 6.2
FF:10169-103B7 60 years, female 7.3
FF:10153-102I9 76 years, female 5.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.0
Samples: 4

Max nTPM: 3.3
Min nTPM: 2.9
Sample A Female 3.0
Sample B Female 2.9
Sample C Male 3.3
Sample D Male 2.9
Entorhinal cortex
nTPM: 5.0
Samples: 4

Max nTPM: 5.9
Min nTPM: 4.5
Sample A Female 5.0
Sample B Female 4.7
Sample C Male 5.9
Sample D Male 4.5
Subiculum
nTPM: 5.6
Samples: 4

Max nTPM: 6.1
Min nTPM: 4.7
Sample A Female 6.1
Sample B Female 4.7
Sample C Male 5.6
Sample D Male 5.9
Ventral hippocampus
nTPM: 4.2
Samples: 4

Max nTPM: 5.9
Min nTPM: 3.4
Sample A Female 3.4
Sample B Female 3.8
Sample C Male 5.9
Sample D Male 3.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.2
Samples: 4

Max nTPM: 6.0
Min nTPM: 2.9
Sample A Male 2.9
Sample B Male 4.3
Sample C Female 6.0
Sample D Female 3.4
Hippocampal formation
nTPM: 4.6
Samples: 4

Max nTPM: 5.7
Min nTPM: 2.9
Sample A Male 4.8
Sample B Male 2.9
Sample C Female 4.9
Sample D Female 5.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.2
2533 Antisense, RP_040526_01_F02, Mouse strain C57BL/6J (56 days, male) 5.6
100144091 Antisense, RP_110421_01_F06, Mouse strain C57BL/6J (56 days, male) 2.7
2534 Antisense, RP_040526_01_F02, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

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