HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:33.4 nTPM
HPA:33.4 nTPM
GTEx:39.8 nTPM
FANTOM5:41.2 Scaled Tags Per Million
Pig:22.4 nTPM
Mouse:54.4 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014141
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.4
Sample id Sample description nTPM
Hippocampus
nTPM: 32.3
1911 Female, age 85, right hemisphere 34.0
1855 Male, age 76, left hemisphere 33.4
2529 Female, age 94, left hemisphere 33.4
1898 Male, age 80, left hemisphere 32.4
2621 Female, age 67, right hemisphere 30.4
2148 Female, age 91, left hemisphere 29.9
Dentate gyrus
nTPM: 32.0
2530 Female, age 94, left hemisphere 35.2
2528 Male, age 74, both hemispheres 34.8
2010 Male, age 76, both hemispheres 34.0
2246 Female, age 85, both hemispheres 30.0
2531 Female, age 67, both hemispheres 29.2
1927 Female, age 91, both hemispheres 28.7
Entorhinal gyrus
nTPM: 29.0
2117 Female, age 91, right hemisphere 33.5
1938 Female, age 85, left hemisphere 29.9
1787 Male, age 76, left hemisphere 29.7
2764 Male, age 80, right hemisphere 27.3
2686 Male, age 75, right hemisphere 26.9
2613 Female, age 94, left hemisphere 26.6
Hippocampus, CA1
nTPM: 29.8
2527 Male, age 74, both hemispheres 31.6
1873 Female, age 85, both hemispheres 30.9
2082 Female, age 91, right hemisphere 29.9
2045 Male, age 76, both hemispheres 29.7
2749 Male, age 80, left hemisphere 26.9
Hippocampus, CA2
nTPM: 32.0
2249 Male, age 74, both hemispheres 36.0
1940 Female, age 85, left hemisphere 32.6
1963 Male, age 80, left hemisphere 31.5
2437 Female, age 94, left hemisphere 31.1
2113 Female, age 91, right hemisphere 30.9
1892 Male, age 76, both hemispheres 29.7
Hippocampus, CA3
nTPM: 30.5
1891 Female, age 85, both hemispheres 34.3
1867 Male, age 76, both hemispheres 32.7
2436 Male, age 74, both hemispheres 31.5
2861 Female, age 67, both hemispheres 28.2
2137 Male, age 80, left hemisphere 28.1
2620 Female, age 94, left hemisphere 28.1
Parahippocampal cortex
nTPM: 29.2
2018 Male, age 76, both hemispheres 33.5
1990 Female, age 91, right hemisphere 30.5
2692 Male, age 74, both hemispheres 29.4
2532 Female, age 72, left hemisphere 29.3
1933 Female, age 85, both hemispheres 29.2
1850 Male, age 80, both hemispheres 28.8
2245 Female, age 91, both hemispheres 28.6
2693 Female, age 94, both hemispheres 28.5
2250 Female, age 67, right hemisphere 28.0
2622 Female, age 67, right hemisphere 26.1
Perirhinal gyrus
nTPM: 27.8
1841 Female, age 85, right hemisphere 28.5
2848 Male, age 76, right hemisphere 28.5
2521 Female, age 94, right hemisphere 28.4
1794 Male, age 80, right hemisphere 26.9
1847 Female, age 91, left hemisphere 26.8
Subiculum
nTPM: 33.4
2042 Male, age 76, both hemispheres 39.0
1901 Male, age 80, both hemispheres 34.5
2729 Female, age 91, right hemisphere 32.8
2438 Female, age 94, left hemisphere 32.3
1977 Female, age 85, both hemispheres 31.9
2619 Male, age 74, both hemispheres 29.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.8
Samples: 197

Max nTPM: 91.8
Min nTPM: 13.0
Std nTPM: 16.7
Median nTPM: 36.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 91.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 88.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 84.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 81.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 77.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 77.5
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 76.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 75.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 72.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 72.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 72.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.2
FF:10153-102I9 76 years, female 41.7
FF:10169-103B7 60 years, female 40.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.4
Samples: 4

Max nTPM: 29.5
Min nTPM: 16.0
Sample A Female 24.7
Sample B Female 19.4
Sample C Male 29.5
Sample D Male 16.0
Entorhinal cortex
nTPM: 16.9
Samples: 4

Max nTPM: 18.3
Min nTPM: 15.5
Sample A Female 16.1
Sample B Female 17.5
Sample C Male 18.3
Sample D Male 15.5
Subiculum
nTPM: 20.3
Samples: 4

Max nTPM: 21.4
Min nTPM: 19.0
Sample A Female 19.0
Sample B Female 20.8
Sample C Male 19.9
Sample D Male 21.4
Ventral hippocampus
nTPM: 20.6
Samples: 4

Max nTPM: 22.8
Min nTPM: 19.3
Sample A Female 22.8
Sample B Female 19.7
Sample C Male 20.7
Sample D Male 19.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 54.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.6
Samples: 4

Max nTPM: 47.4
Min nTPM: 37.3
Sample A Male 47.4
Sample B Male 42.7
Sample C Female 43.1
Sample D Female 37.3
Hippocampal formation
nTPM: 54.4
Samples: 4

Max nTPM: 62.7
Min nTPM: 47.5
Sample A Male 47.5
Sample B Male 52.0
Sample C Female 62.7
Sample D Female 55.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
69838712 Antisense, RP_050321_01_A10, Mouse strain C57BL/6J (56 days, male) 2.9
75233089 Antisense, RP_060220_02_G06, Mouse strain C57BL/6J (56 days, male) 1.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.