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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:207.1 nTPM
FANTOM5:516.3 Scaled Tags Per Million
Pig:32.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA044840
Glial cells Low
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 207.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 207.1
Samples: 246

Max nTPM: 628.3
Min nTPM: 26.7
Std nTPM: 115.3
Median nTPM: 175.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 628.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 589.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 575.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 555.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 517.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 488.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 485.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 483.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 482.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 466.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 460.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 458.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 444.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 443.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 443.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 438.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 437.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 437.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 433.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 430.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 417.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 395.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 390.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 387.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 373.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 371.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 371.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 361.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 360.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 357.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 354.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 339.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 338.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 334.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 330.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 327.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 323.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 320.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 317.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 311.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 311.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 310.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 310.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 304.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 300.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 299.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 298.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 297.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 296.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 290.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 284.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 281.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 276.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 275.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 273.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 270.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 268.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 265.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 265.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 255.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 252.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 251.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 251.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 250.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 250.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 248.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 246.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 241.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 241.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 239.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 235.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 235.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 234.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 234.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 232.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 231.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 229.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 226.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 225.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 224.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 224.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 223.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 222.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 221.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 219.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 218.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 218.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 218.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 216.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 216.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 214.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 214.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 213.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 212.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 211.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 211.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 210.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 210.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 209.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 207.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 206.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 204.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 203.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 203.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 199.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 196.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 195.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 193.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 193.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 191.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 190.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 189.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 188.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 187.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 186.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 183.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 183.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 182.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 182.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 181.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 177.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 177.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 176.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 175.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 174.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 171.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 170.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 169.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 169.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 168.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 165.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 164.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 164.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 163.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 163.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 163.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 162.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 162.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 159.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 159.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 159.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 157.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 157.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 155.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 155.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 154.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 154.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 154.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 154.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 153.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 153.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 153.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 152.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 151.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 151.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 148.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 148.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 148.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 148.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 146.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 145.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 142.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 141.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 139.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 138.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 138.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 137.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 136.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 136.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 135.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 135.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 133.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 133.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 133.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 132.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 131.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 131.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 131.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 131.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 130.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 130.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 128.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 127.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 125.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 125.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 125.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 125.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 125.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 125.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 123.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 122.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 122.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 121.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 121.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 120.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 119.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 118.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 118.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 117.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 117.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 116.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 113.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 113.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 113.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 112.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 111.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 110.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 108.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 108.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 108.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 107.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 106.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 104.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 102.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 101.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 100.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 100.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 99.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 98.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 97.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 97.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 96.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 96.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 95.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 92.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 89.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 87.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 87.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 86.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 86.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 82.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 77.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 76.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 69.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 67.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 67.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 56.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 55.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 52.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 43.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 42.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 40.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 32.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 31.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 30.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 26.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 516.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 516.3
FF:10164-103B2 76 years, female 516.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 32.2
Pig sample Sample description nTPM
Caudate
nTPM: 32.2
Samples: 4

Max nTPM: 35.9
Min nTPM: 26.6
Sample A Female 26.6
Sample B Female 35.8
Sample C Male 35.9
Sample D Male 30.4

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