HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:54.0 nTPM
HPA:54.0 nTPM
GTEx:77.3 nTPM
FANTOM5:181.7 Scaled Tags Per Million
Pig:164.2 nTPM
Mouse:66.6 nTPM
Allen mouse:10.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007533
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.0
Sample id Sample description nTPM
Hippocampus
nTPM: 46.5
2148 Female, age 91, left hemisphere 58.3
2621 Female, age 67, right hemisphere 52.8
1911 Female, age 85, right hemisphere 50.9
2529 Female, age 94, left hemisphere 48.4
1898 Male, age 80, left hemisphere 42.9
1855 Male, age 76, left hemisphere 25.9
Dentate gyrus
nTPM: 43.7
2530 Female, age 94, left hemisphere 58.0
2010 Male, age 76, both hemispheres 50.8
2531 Female, age 67, both hemispheres 50.1
1927 Female, age 91, both hemispheres 43.4
2528 Male, age 74, both hemispheres 40.7
2246 Female, age 85, both hemispheres 19.3
Entorhinal gyrus
nTPM: 54.0
2764 Male, age 80, right hemisphere 69.2
2117 Female, age 91, right hemisphere 67.8
2613 Female, age 94, left hemisphere 58.3
1938 Female, age 85, left hemisphere 49.0
2686 Male, age 75, right hemisphere 43.8
1787 Male, age 76, left hemisphere 35.7
Hippocampus, CA1
nTPM: 40.6
2749 Male, age 80, left hemisphere 56.8
2045 Male, age 76, both hemispheres 53.3
1873 Female, age 85, both hemispheres 43.9
2527 Male, age 74, both hemispheres 33.6
2082 Female, age 91, right hemisphere 15.1
Hippocampus, CA2
nTPM: 27.5
1963 Male, age 80, left hemisphere 46.1
2437 Female, age 94, left hemisphere 45.2
1892 Male, age 76, both hemispheres 33.5
2249 Male, age 74, both hemispheres 21.5
2113 Female, age 91, right hemisphere 18.7
1940 Female, age 85, left hemisphere 0.0
Hippocampus, CA3
nTPM: 52.0
2620 Female, age 94, left hemisphere 80.9
2861 Female, age 67, both hemispheres 66.7
2137 Male, age 80, left hemisphere 66.0
1891 Female, age 85, both hemispheres 44.9
1867 Male, age 76, both hemispheres 38.9
2436 Male, age 74, both hemispheres 14.5
Parahippocampal cortex
nTPM: 28.3
2692 Male, age 74, both hemispheres 43.1
2532 Female, age 72, left hemisphere 40.7
2245 Female, age 91, both hemispheres 39.9
2018 Male, age 76, both hemispheres 35.5
2622 Female, age 67, right hemisphere 32.5
1990 Female, age 91, right hemisphere 30.8
2693 Female, age 94, both hemispheres 27.5
1850 Male, age 80, both hemispheres 20.0
1933 Female, age 85, both hemispheres 12.7
2250 Female, age 67, right hemisphere 0.0
Perirhinal gyrus
nTPM: 14.5
2848 Male, age 76, right hemisphere 53.1
1794 Male, age 80, right hemisphere 13.8
1847 Female, age 91, left hemisphere 5.9
1841 Female, age 85, right hemisphere 0.0
2521 Female, age 94, right hemisphere 0.0
Subiculum
nTPM: 45.1
1901 Male, age 80, both hemispheres 61.0
2042 Male, age 76, both hemispheres 56.4
2438 Female, age 94, left hemisphere 39.3
1977 Female, age 85, both hemispheres 39.1
2619 Male, age 74, both hemispheres 38.0
2729 Female, age 91, right hemisphere 36.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 77.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 77.3
Samples: 197

Max nTPM: 144.9
Min nTPM: 29.0
Std nTPM: 18.6
Median nTPM: 75.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 144.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 127.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 126.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 121.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 117.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 117.7
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 117.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 116.0
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 115.3
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 114.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 113.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 181.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 181.7
FF:10153-102I9 76 years, female 200.2
FF:10169-103B7 60 years, female 163.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 164.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 156.6
Samples: 4

Max nTPM: 171.6
Min nTPM: 136.5
Sample A Female 171.6
Sample B Female 150.3
Sample C Male 167.9
Sample D Male 136.5
Entorhinal cortex
nTPM: 157.4
Samples: 4

Max nTPM: 172.2
Min nTPM: 136.7
Sample A Female 172.2
Sample B Female 136.7
Sample C Male 149.6
Sample D Male 170.9
Subiculum
nTPM: 134.6
Samples: 4

Max nTPM: 190.5
Min nTPM: 93.0
Sample A Female 190.5
Sample B Female 117.7
Sample C Male 137.0
Sample D Male 93.0
Ventral hippocampus
nTPM: 164.2
Samples: 4

Max nTPM: 226.4
Min nTPM: 130.8
Sample A Female 147.9
Sample B Female 130.8
Sample C Male 226.4
Sample D Male 151.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 66.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 66.6
Samples: 4

Max nTPM: 73.7
Min nTPM: 58.7
Sample A Male 73.7
Sample B Male 72.4
Sample C Female 61.6
Sample D Female 58.7
Hippocampal formation
nTPM: 60.8
Samples: 4

Max nTPM: 67.4
Min nTPM: 54.2
Sample A Male 54.2
Sample B Male 67.4
Sample C Female 56.0
Sample D Female 65.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.8
77620379 Antisense, RP_070205_01_D12, Mouse strain C57BL/6J (56 days, male) 14.0
77413698 Antisense, RP_070205_01_D12, Mouse strain C57BL/6J (56 days, male) 12.7
2424 Antisense, RP_Baylor_102930, Mouse strain C57BL/6J (56 days, male) 7.6
2423 Antisense, RP_Baylor_102930, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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