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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 215.9
Min nTPM: 1.2
Std nTPM: 23.5
Median nTPM: 12.0
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
215.9
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
153.6
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
127.3
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
125.9
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
81.5
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
67.8
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
57.9
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
56.8
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
54.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
45.5
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
43.9
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
41.5
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
35.7
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
34.9
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
34.9
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
34.8
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
32.7
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
32.4
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
31.9
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
29.6
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
29.0
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
28.3
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
27.8
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
27.0
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
26.6
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
26.4
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
24.9
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
24.7
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
24.1
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
23.4
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
23.2
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
23.0
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
22.9
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
22.5
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
22.4
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
22.3
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
21.9
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
21.6
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
21.4
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
21.3
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
21.3
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
20.8
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
20.5
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
20.4
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
20.3
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
19.5
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
19.1
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
19.0
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
19.0
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
18.8
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
18.8
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
18.4
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
18.2
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
18.2
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
18.1
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
18.0
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
17.8
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
17.7
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
17.5
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
17.4
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
16.9
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
16.9
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
16.8
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
16.6
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
16.5
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
16.0
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
15.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
15.7
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
15.7
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
15.1
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
15.0
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
14.8
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
14.6
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
14.2
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
14.1
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
14.0
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
14.0
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
13.8
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
13.7
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
13.7
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
13.7
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
13.7
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
13.6
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
13.5
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
13.4
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
13.4
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
13.4
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
13.2
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
13.1
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
13.1
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
12.9
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
12.8
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
12.7
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
12.6
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
12.4
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
12.3
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
12.3
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
12.0
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
12.0
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
11.9
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
11.9
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
11.9
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
11.7
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
11.7
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
11.6
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
11.6
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
11.6
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
11.5
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
11.1
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
11.0
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
10.9
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
10.7
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
10.6
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
10.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
10.6
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
10.5
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
10.4
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
10.2
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
10.1
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
9.9
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
9.9
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
9.6
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
9.6
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
9.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
9.4
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
9.2
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
9.2
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
9.2
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
9.1
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
9.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
9.1
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
9.0
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
9.0
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
9.0
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
8.6
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
8.5
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
8.5
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
8.5
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
8.4
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
8.4
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
8.4
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
8.4
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
8.2
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
8.2
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
8.1
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
7.9
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
7.9
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
7.8
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
7.8
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
7.7
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
7.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
7.5
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
7.3
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
7.2
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
7.1
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
7.1
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
7.0
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
7.0
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
6.9
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
6.9
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
6.9
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
6.8
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
6.8
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
6.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
6.8
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
6.7
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
6.6
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
6.5
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
6.5
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
6.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
6.2
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
5.9
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
5.4
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
5.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
5.4
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
5.1
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
4.9
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
4.8
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
4.7
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
4.6
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
4.5
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
4.4
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
4.3
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
4.2
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
4.1
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
4.1
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
4.1
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
3.9
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
3.9
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
3.5
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
3.5
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
2.9
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
2.4
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
2.4
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
2.1
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
1.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
1.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.